Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 1.3e-134 483.0 246 100.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 3.6e-103 378.6 232 81.0
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 2.3e-102 375.9 229 80.8
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 2.3e-102 375.9 232 78.9
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 2.3e-102 375.9 232 79.7
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 5.1e-102 374.8 231 78.4
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 5.1e-102 374.8 232 78.4
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.8e-102 374.0 243 77.8
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.5e-101 372.5 245 76.3
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 9.7e-101 370.5 243 77.0
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 6.9e-99 364.4 245 73.1
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 9.1e-99 364.0 231 78.4
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.5e-98 363.2 232 78.0
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 3.4e-98 362.1 229 79.0
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.5e-98 361.7 246 74.0
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 5.9e-98 361.3 229 78.2
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 7.7e-98 360.9 232 77.6
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 7.7e-98 360.9 232 75.4
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.7e-97 359.8 263 68.8
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 3.8e-97 358.6 246 72.8
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 6.5e-97 357.8 242 74.0
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.4e-96 356.7 240 75.0
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.5e-96 355.9 229 76.9
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 3.2e-96 355.5 231 75.8
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 4.2e-96 355.1 242 71.5
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.5e-96 354.8 240 73.8
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 7.2e-96 354.4 233 76.0
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.1e-95 352.8 232 76.3
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 6.1e-95 351.3 232 75.4
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 2.3e-94 349.4 230 74.8
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 3.9e-94 348.6 230 71.3
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 6.7e-94 347.8 242 73.1
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.7e-92 343.2 242 71.5
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 2.8e-92 342.4 231 73.2
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 2.8e-92 342.4 231 72.3
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 4.8e-92 341.7 231 73.2
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 6.3e-92 341.3 239 71.1
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.8e-91 339.7 271 63.5
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 2.4e-91 339.3 231 73.2
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 9.1e-91 337.4 267 66.3
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.0e-90 336.3 230 68.7
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 2.6e-90 335.9 241 68.9
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 3.5e-90 335.5 241 68.0
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 4.5e-90 335.1 246 72.0
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 5.9e-90 334.7 232 69.4
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.3e-89 333.6 230 67.8
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 5.0e-89 331.6 266 65.8
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 5.0e-89 331.6 240 69.2
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 1.1e-88 330.5 232 67.7
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.5e-88 330.1 229 73.8
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 2.5e-88 329.3 243 69.1
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.2e-88 328.9 267 64.4
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 1.6e-87 326.6 238 68.9
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 1.6e-87 326.6 229 72.1
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 2.7e-87 325.9 231 70.1
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 3.6e-87 325.5 232 67.7
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 6.1e-87 324.7 266 64.3
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.0e-86 323.9 230 70.4
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.4e-86 323.6 232 66.8
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.3e-86 322.8 236 65.7
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 2.3e-86 322.8 237 70.0
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 3.0e-86 322.4 252 66.7
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 3.0e-86 322.4 246 65.9
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 4.0e-86 322.0 232 66.4
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 6.7e-86 321.2 239 67.8
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 1.1e-85 320.5 229 70.3
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 1.5e-85 320.1 239 67.8
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.5e-85 320.1 237 68.4
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.5e-85 320.1 237 68.4
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 2.6e-85 319.3 244 66.4
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 3.3e-85 318.9 247 66.0
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 7.5e-85 317.8 238 68.1
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 9.7e-85 317.4 230 68.7
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 1.3e-84 317.0 237 68.4
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.8e-84 315.8 252 63.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 2.8e-84 315.8 240 67.5
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 2.8e-84 315.8 240 67.5
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 4.8e-84 315.1 245 64.9
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.1e-83 313.9 241 66.0
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.4e-83 313.5 241 66.0
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 1.4e-83 313.5 205 76.6
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.4e-83 313.5 245 65.3
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 1.5e-80 303.5 251 63.3
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.9e-80 303.1 233 65.2
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 4.2e-80 302.0 241 62.7
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 4.2e-80 302.0 241 65.1
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 7.2e-80 301.2 253 59.3
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.6e-79 300.1 270 60.0
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 9.8e-77 290.8 280 55.4
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.7e-76 290.0 235 60.0
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 4.1e-75 285.4 269 55.4
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 2.2e-73 279.6 227 60.4
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 6.5e-73 278.1 250 59.2
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.1e-72 277.3 218 66.1
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.6e-71 273.5 242 58.3
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 6.8e-70 268.1 177 74.6
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 2.8e-68 262.7 233 61.8
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 1.5e-64 250.4 177 71.2
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 9.5e-56 221.1 221 54.3
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 2.3e-54 216.5 120 84.2
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 2.2e-52 209.9 264 44.7
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.4e-51 206.5 256 44.1
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 5.4e-51 205.3 240 51.7
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 5.6e-48 195.3 242 49.6
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 9.5e-48 194.5 133 69.9
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 3.7e-44 182.6 172 51.7
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 4.9e-44 182.2 241 44.4
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 1.6e-34 150.6 121 59.5
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 1.7e-28 130.6 120 58.3
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.9e-28 129.8 147 53.7
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 4.5e-21 105.9 106 56.6
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 1.1e-19 101.3 139 37.4
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 4.2e-19 99.4 112 50.9
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.3e-08 62.8 38 81.6
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 4.8e-07 59.3 133 34.6
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 6.2e-07 58.9 42 59.5


User provided reference genes

Program Settings