Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 1.5e-144 516.2 267 100.0
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 6.8e-100 367.9 271 73.8
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 5.8e-99 364.8 279 73.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.3e-98 363.6 279 72.4
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.9e-97 359.8 276 72.8
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 2.4e-97 359.4 273 72.5
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 4.1e-97 358.6 270 74.1
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.6e-96 356.7 279 73.8
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 4.6e-96 355.1 271 70.8
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 7.8e-96 354.4 272 73.5
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.0e-95 354.0 288 68.8
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.7e-95 353.2 243 78.2
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 6.6e-95 351.3 273 72.5
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.1e-94 350.5 282 71.6
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.6e-94 348.2 275 70.5
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 5.6e-94 348.2 275 70.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 9.5e-94 347.4 286 68.2
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 9.5e-94 347.4 277 70.4
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.3e-92 342.8 257 70.4
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 5.2e-92 341.7 272 69.9
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 6.8e-92 341.3 262 71.0
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.2e-91 340.5 268 70.5
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 1.5e-91 340.1 276 69.9
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 9.9e-91 337.4 240 75.8
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.9e-90 335.9 273 69.2
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.9e-90 335.9 279 70.3
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 3.7e-90 335.5 277 68.2
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 8.4e-90 334.3 273 68.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 8.4e-90 334.3 269 71.0
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.1e-89 334.0 262 71.0
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.4e-89 333.6 284 68.7
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.9e-89 333.2 266 71.1
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.4e-89 332.8 200 86.5
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 7.1e-89 331.3 233 77.7
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 7.1e-89 331.3 200 86.0
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 9.2e-89 330.9 240 73.8
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 4.6e-88 328.6 277 68.2
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.0e-87 327.4 264 68.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.0e-87 327.4 282 67.4
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.3e-87 326.2 282 67.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.0e-87 325.9 217 78.8
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 3.0e-87 325.9 296 66.2
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 3.9e-87 325.5 203 81.3
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 5.1e-87 325.1 201 81.1
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 5.1e-87 325.1 217 78.8
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 6.6e-87 324.7 272 66.9
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 6.6e-87 324.7 187 86.1
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 6.6e-87 324.7 201 85.1
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 8.6e-87 324.3 189 86.8
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 8.6e-87 324.3 270 67.4
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.1e-86 323.9 234 76.5
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.5e-86 323.6 267 68.5
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.5e-86 322.8 233 75.5
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 4.3e-86 322.0 219 78.1
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 4.3e-86 322.0 222 75.2
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.6e-86 321.6 199 84.4
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 5.6e-86 321.6 232 75.4
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 9.6e-86 320.9 244 74.6
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.2e-85 320.5 205 82.4
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.2e-85 320.5 186 86.0
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.8e-85 319.3 200 83.5
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 2.8e-85 319.3 221 76.9
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 3.6e-85 318.9 201 82.1
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 3.6e-85 318.9 291 67.0
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 4.7e-85 318.5 202 81.7
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.7e-85 318.5 280 67.5
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 6.2e-85 318.2 258 68.6
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 8.1e-85 317.8 186 83.9
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.4e-84 317.0 231 70.1
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 4.0e-84 315.5 224 75.9
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.2e-83 313.9 273 64.5
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.2e-83 313.9 277 66.4
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.0e-83 313.2 202 81.2
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.6e-83 312.8 266 65.8
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 2.6e-83 312.8 266 65.8
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 3.4e-83 312.4 191 83.8
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 5.8e-83 311.6 268 64.2
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 5.8e-83 311.6 260 69.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 2.4e-81 306.2 241 69.7
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 5.4e-81 305.1 273 65.9
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 5.4e-81 305.1 273 65.9
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.6e-80 303.5 273 65.6
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.1e-80 303.1 272 64.3
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.1e-80 303.1 283 64.0
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 2.1e-80 303.1 269 65.8
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.1e-80 303.1 215 72.1
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.7e-80 302.8 275 65.1
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 4.6e-80 302.0 271 65.3
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 4.6e-80 302.0 272 64.7
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.6e-80 302.0 278 64.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 6.0e-80 301.6 198 79.3
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 6.0e-80 301.6 201 78.6
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.0e-79 300.8 271 63.8
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 2.3e-79 299.7 278 64.4
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.1e-79 298.5 254 65.7
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 3.3e-78 295.8 271 64.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 3.3e-78 295.8 186 81.7
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 4.3e-78 295.4 219 68.0
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.3e-77 293.9 187 74.9
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 7.6e-75 284.6 277 61.4
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 3.3e-70 269.2 222 67.1
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 6.2e-69 265.0 203 64.0
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 9.9e-67 257.7 188 66.0
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.8e-63 246.9 201 61.7
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 8.7e-63 244.6 216 60.2
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.5e-62 243.8 235 62.6
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.4e-60 237.3 275 55.3
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.3e-58 230.7 138 87.7
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 7.9e-56 221.5 132 81.8
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.8e-55 220.3 206 61.7
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.2e-48 197.6 110 89.1
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 7.9e-48 194.9 204 50.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 5.1e-47 192.2 155 64.5
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.1e-46 191.0 195 49.7
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 2.5e-46 189.9 180 59.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.4e-41 174.1 110 73.6
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 1.1e-36 157.9 235 40.9
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.8e-31 140.6 119 71.4
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.6e-27 126.7 85 70.6
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 8.0e-16 88.6 71 64.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.7e-13 80.9 149 40.9
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 2.8e-13 80.1 50 74.0
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 1.6e-08 64.3 44 65.9
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.6e-08 63.2 44 72.7
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 4.7e-08 62.8 121 38.8


User provided reference genes

Program Settings