Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 1.5e-127 459.5 234 100.0
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 2.4e-93 345.9 223 74.0
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 7.8e-92 340.9 217 76.5
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 1.0e-91 340.5 220 75.0
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 1.0e-91 340.5 220 75.5
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 4.3e-90 335.1 221 74.2
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 7.3e-90 334.3 220 73.2
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 1.2e-89 333.6 223 74.0
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 2.1e-89 332.8 218 74.8
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 3.6e-89 332.0 220 73.6
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 8.1e-89 330.9 217 73.3
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.1e-88 330.5 220 72.7
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 1.4e-88 330.1 224 72.3
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 5.2e-88 328.2 220 73.2
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 1.5e-87 326.6 221 72.4
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 2.0e-87 326.2 218 72.0
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 2.0e-87 326.2 235 69.8
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 1.7e-86 323.2 220 71.8
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 6.4e-86 321.2 218 71.1
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 8.4e-86 320.9 222 69.4
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 1.9e-85 319.7 224 69.6
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 7.1e-85 317.8 222 68.0
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 9.3e-85 317.4 223 69.1
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 1.2e-84 317.0 221 69.2
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 1.2e-84 317.0 226 67.7
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 1.2e-84 317.0 244 65.6
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.6e-84 316.6 219 68.5
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 2.7e-84 315.8 223 67.7
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 2.7e-84 315.8 219 67.6
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.7e-84 315.8 219 67.6
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 2.7e-84 315.8 224 69.6
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 2.7e-84 315.8 228 69.3
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 3.5e-84 315.5 223 68.6
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 3.5e-84 315.5 220 68.2
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 6.0e-84 314.7 225 68.4
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 1.0e-83 313.9 220 66.4
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 1.0e-83 313.9 227 68.3
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 1.3e-83 313.5 220 69.1
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 1.7e-83 313.2 226 67.3
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.7e-83 313.2 219 67.6
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 2.3e-83 312.8 221 69.7
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 3.0e-83 312.4 219 68.5
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 5.1e-83 311.6 225 67.6
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 5.1e-83 311.6 225 68.0
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 5.1e-83 311.6 222 68.5
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 8.7e-83 310.8 223 67.7
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 8.7e-83 310.8 229 66.4
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 1.9e-82 309.7 219 69.4
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 1.9e-82 309.7 234 65.8
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 4.3e-82 308.5 222 66.2
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 5.6e-82 308.1 231 66.2
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 7.3e-82 307.8 232 65.5
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 9.6e-82 307.4 217 67.7
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 9.6e-82 307.4 222 65.8
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 1.3e-81 307.0 230 67.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 2.1e-81 306.2 228 65.4
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 2.8e-81 305.8 220 67.3
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 4.8e-81 305.1 219 67.1
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 6.2e-81 304.7 232 63.8
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 8.1e-81 304.3 222 68.5
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 1.4e-80 303.5 225 65.8
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 3.1e-80 302.4 229 65.5
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 3.1e-80 302.4 224 65.2
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 6.9e-80 301.2 222 67.6
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 2.0e-79 299.7 221 63.8
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 4.5e-79 298.5 225 65.8
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 1.3e-78 297.0 209 68.9
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 2.2e-78 296.2 218 65.6
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 2.2e-78 296.2 221 66.5
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 4.9e-78 295.0 219 63.5
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 8.4e-78 294.3 219 63.9
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 8.4e-78 294.3 226 65.0
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.1e-77 293.9 221 62.9
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.1e-77 293.9 220 67.3
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 2.4e-77 292.7 229 62.9
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 4.2e-77 292.0 219 64.4
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 1.0e-75 287.3 222 65.3
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 4.3e-74 282.0 222 61.7
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 5.6e-74 281.6 227 62.1
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 1.2e-71 273.9 246 56.1
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 4.5e-71 271.9 245 58.0
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.3e-70 270.4 158 79.1
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.8e-70 268.9 245 57.6
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.8e-70 268.9 245 57.1
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 3.2e-69 265.8 230 57.8
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 7.1e-69 264.6 220 63.6
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 7.9e-68 261.2 225 57.3
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 1.8e-67 260.0 230 57.4
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 7.4e-66 254.6 161 73.9
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 2.8e-65 252.7 167 73.7
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 3.1e-64 249.2 158 75.3
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 3.4e-63 245.7 138 81.9
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 1.4e-61 240.4 171 67.8
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 4.2e-61 238.8 163 68.7
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 4.6e-60 235.3 175 68.0
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 4.3e-58 228.8 223 53.8
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 1.4e-56 223.8 221 52.9
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 4.1e-56 222.2 228 52.6
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 3.4e-55 219.2 228 52.2
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 4.5e-55 218.8 229 48.9
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 4.5e-55 218.8 230 49.1
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 2.9e-54 216.1 178 60.1
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 6.5e-54 214.9 172 63.4
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 1.1e-53 214.2 220 51.4
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 9.3e-53 211.1 168 61.9
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 1.4e-45 187.2 120 72.5
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 4.2e-45 185.7 143 60.1
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 1.6e-44 183.7 120 70.0
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 3.3e-42 176.0 179 50.3
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 5.7e-42 175.3 108 74.1
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 1.6e-36 157.1 118 64.4
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 1.3e-33 147.5 144 56.2
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 3.7e-33 146.0 145 55.9
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 5.3e-32 142.1 114 62.3
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 1.3e-25 120.9 223 36.3
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 3.5e-23 112.8 106 52.8
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 3.1e-16 89.7 81 54.3
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 3.1e-16 89.7 81 54.3
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.9e-15 85.5 60 63.3
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 5.9e-15 85.5 65 64.6
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 5.9e-15 85.5 65 64.6
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 4.0e-11 72.8 47 70.2
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.0e-06 58.2 182 25.3


User provided reference genes

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