Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01479 Eucalyptus grandis HOM05D007460 ORTHO05D009396 5.6e-218 760.8 414 100.0
PGR142G0431 Punica granatum HOM05D007460 ORTHO05D009396 4.0e-123 445.7 394 69.0
Prupe.8G173000 Prunus persica HOM05D007460 ORTHO05D009396 9.5e-117 424.5 382 67.8
Cpa.g.sc2033.1 Carica papaya HOM05D007460 ORTHO05D009396 4.7e-116 422.2 376 68.4
Thecc.02G051900 Theobroma cacao HOM05D007460 ORTHO05D009396 8.9e-115 417.9 374 62.6
RcHm_v2.0_Chr6g0279541 Rosa chinensis HOM05D007460 ORTHO05D009396 4.9e-113 412.1 378 64.8
Haze_02061 Corylus avellana HOM05D007460 ORTHO05D009396 1.1e-112 411.0 369 68.0
Dinv41900 Davidia involucrata HOM05D007460 ORTHO05D009396 1.1e-112 411.0 370 67.3
Ciclev10028628m.g Citrus clementina HOM05D007460 ORTHO05D009396 3.5e-111 406.0 385 58.7
Gohir.D02G228100 Gossypium hirsutum HOM05D007460 ORTHO05D009396 4.6e-111 405.6 386 58.3
Gohir.A03G206700 Gossypium hirsutum HOM05D007460 ORTHO05D009396 7.8e-111 404.8 386 58.3
Gorai.005G256000 Gossypium raimondii HOM05D007460 ORTHO05D009396 7.8e-111 404.8 386 58.3
COL.COLO4_17993 Corchorus olitorius HOM05D007460 ORTHO05D009396 1.7e-110 403.7 383 58.2
MD05G1128900 Malus domestica HOM05D007460 ORTHO05D009396 3.9e-110 402.5 387 63.8
Sabra09G0109400 Salix brachista HOM05D007460 ORTHO05D009396 5.1e-110 402.1 370 66.5
arahy.Tifrunner.gnm1.ann1.T9T391 Arachis hypogaea HOM05D007460 ORTHO05D009396 6.6e-110 401.7 361 68.7
QL11p053448 Quercus lobata HOM05D007460 ORTHO05D009396 8.6e-110 401.4 375 65.1
ClCG02G003690 Citrullus lanatus HOM05D007460 ORTHO05D009396 1.5e-109 400.6 363 66.9
Duzib052G0247 Durio zibethinus HOM05D007460 ORTHO05D009396 1.5e-109 400.6 378 62.4
Lalb_Chr03g0024631 Lupinus albus HOM05D007460 ORTHO05D009396 2.1e-108 396.7 365 59.2
Potri.009G140500 Populus trichocarpa HOM05D007460 ORTHO05D009396 2.8e-108 396.4 376 64.6
CANSAT25G2588 Cannabis sativa HOM05D007460 ORTHO05D009396 8.1e-108 394.8 368 64.4
Nitab4.5_0006969g0010 Nicotiana tabacum HOM05D007460 ORTHO05D009396 1.1e-107 394.4 369 66.7
Nitab4.5_0001239g0010 Nicotiana tabacum HOM05D007460 ORTHO05D009396 1.4e-107 394.0 373 66.0
FvH4_2g16010 Fragaria vesca HOM05D007460 ORTHO05D009396 3.1e-107 392.9 378 64.6
FAN24G0563 Fragaria x ananassa HOM05D007460 ORTHO05D009396 3.1e-107 392.9 378 64.6
Ca_18990_v3 Cicer arietinum L. HOM05D007460 ORTHO05D009396 8.9e-107 391.3 375 58.9
FAN20G2849 Fragaria x ananassa HOM05D007460 ORTHO05D009396 1.2e-106 391.0 367 66.2
Medtr4g075710 Medicago truncatula HOM05D007460 ORTHO05D009396 3.4e-106 389.4 308 66.2
Rhsim11G0195400 Rhododendron simsii HOM05D007460 ORTHO05D009396 3.4e-106 389.4 385 56.6
THA.LOC104804083 Tarenaya hassleriana HOM05D007460 ORTHO05D009396 3.4e-106 389.4 388 62.9
Lj3g0017881 Lotus japonicus HOM05D007460 ORTHO05D009396 4.4e-106 389.0 390 56.9
FAN27G2235 Fragaria x ananassa HOM05D007460 ORTHO05D009396 5.8e-106 388.7 376 64.4
FAN15G0958 Fragaria x ananassa HOM05D007460 ORTHO05D009396 2.9e-105 386.3 367 64.3
MELO3C013306.2 Cucumis melo HOM05D007460 ORTHO05D009396 4.9e-105 385.6 372 57.8
Solyc02g087400.1 Solanum lycopersicum HOM05D007460 ORTHO05D009396 6.4e-105 385.2 370 65.9
ECA233G4948 Erigeron canadensis HOM05D007460 ORTHO05D009396 1.1e-104 384.4 367 64.0
Manes.08G120200 Manihot esculenta HOM05D007460 ORTHO05D009396 1.9e-104 383.6 381 63.8
Sopen02g032150 Solanum pennellii HOM05D007460 ORTHO05D009396 1.9e-104 383.6 370 65.9
VMungo1127G1591 Vigna mungo HOM05D007460 ORTHO05D009396 2.4e-104 383.3 371 58.5
PGSC0003DMG400001299 Solanum tuberosum HOM05D007460 ORTHO05D009396 4.1e-104 382.5 370 65.1
Phvul.011G025300 Phaseolus vulgaris HOM05D007460 ORTHO05D009396 9.2e-104 381.3 327 63.6
TWI79G0886 Tripterygium wilfordii HOM05D007460 ORTHO05D009396 1.6e-103 380.6 370 57.8
CAN.G206.79 Capsicum annuum HOM05D007460 ORTHO05D009396 2.1e-103 380.2 372 64.5
Glyma.11G097200 Glycine max HOM05D007460 ORTHO05D009396 4.6e-103 379.0 369 58.5
Lsat_1_v5_gn_6_28360 Lactuca sativa HOM05D007460 ORTHO05D009396 1.3e-102 377.5 383 62.4
Sed0015555 Sechium edule HOM05D007460 ORTHO05D009396 2.3e-102 376.7 365 66.6
CiPaw.05G087600 Carya illinoinensis HOM05D007460 ORTHO05D009396 3.0e-102 376.3 368 58.2
Peaxi162Scf00332g00111 Petunia axillaris HOM05D007460 ORTHO05D009396 3.9e-102 375.9 368 57.3
MBI05_g32371_MAGBIO Magnolia biondii HOM05D007460 ORTHO05D009396 1.2e-100 370.9 396 61.4
Oeu019189.1 Olea europaea HOM05D007460 ORTHO05D009396 1.6e-100 370.5 367 56.1
CsaV3_7G001450 Cucumis sativus L. HOM05D007460 ORTHO05D009396 2.1e-100 370.2 374 56.7
Psat7g178840 Pisum sativum HOM05D007460 ORTHO05D009396 2.4e-99 366.7 402 55.5
HanXRQChr03g0091771 Helianthus annuus HOM05D007460 ORTHO05D009396 3.1e-99 366.3 392 58.2
CDE04G3076 Ceratophyllum demersum HOM05D000201 ORTHO05D000490 8.9e-99 364.8 409 57.9
TAR381G0286 Trochodendron aralioides HOM05D007460 ORTHO05D009396 1.5e-98 364.0 348 59.5
Thhalv10000208m.g Eutrema salsugineum HOM05D007460 ORTHO05D009396 7.6e-98 361.7 371 64.2
Migut.N01901 Erythranthe guttata HOM05D007460 ORTHO05D009396 1.3e-97 360.9 357 54.6
unitig_899.g15575 Utricularia gibba HOM05D007460 ORTHO05D009396 2.4e-96 356.7 304 60.9
Sp4g00040 Schrenkiella parvula HOM05D007460 ORTHO05D009396 5.4e-96 355.5 304 68.8
BcaC07g37167 Brassica carinata HOM05D007460 ORTHO05D009396 1.2e-95 354.4 360 61.9
BraA08t32533Z Brassica rapa HOM05D007460 ORTHO05D009396 1.6e-95 354.0 360 61.9
C08p05400 Brassica napus HOM05D007460 ORTHO05D009396 3.5e-95 352.8 360 61.9
A08p05160 Brassica napus HOM05D007460 ORTHO05D009396 4.6e-95 352.4 366 61.5
BolC8t47357H Brassica oleracea HOM05D007460 ORTHO05D009396 4.6e-95 352.4 360 61.7
DCAR_003202 Daucus carota HOM05D007460 ORTHO05D009396 4.6e-95 352.4 357 54.9
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 1.7e-94 350.5 361 60.1
Ah.12g063930 Amaranthus hybridus HOM05D007460 ORTHO05D009396 1.7e-94 350.5 374 52.9
BcaB04g17460 Brassica carinata HOM05D007460 ORTHO05D009396 1.7e-94 350.5 369 61.2
Actinidia20546 Actinidia chinensis HOM05D007460 ORTHO05D009396 4.3e-93 345.9 379 60.9
Aa31LG9G10 Aethionema arabicum HOM05D001485 ORTHO05D001384 5.6e-93 345.5 306 66.7
Aqoxy6G01856 Aquilegia oxysepala HOM05D007460 ORTHO05D009396 7.3e-93 345.1 392 51.5
Sc14g0002370 Simmondsia chinensis HOM05D007460 ORTHO05D009396 9.6e-93 344.7 386 56.5
Carub.0002s2147 Capsella rubella HOM05D007460 ORTHO05D009396 3.6e-92 342.8 357 62.2
CARHR142840 Cardamine hirsuta HOM05D007460 ORTHO05D009396 1.1e-91 341.3 364 61.0
unitig_746.g26838 Utricularia gibba HOM05D007460 ORTHO05D009396 9.0e-91 338.2 337 54.3
AT2G47450 Arabidopsis thaliana HOM05D007460 ORTHO05D009396 1.2e-90 337.8 377 61.0
PSO541G5676 Papaver somniferum HOM05D007460 ORTHO05D009396 9.9e-90 334.7 400 49.2
EL10Ac2g02588 Beta vulgaris HOM05D007460 ORTHO05D009396 1.2e-87 327.8 290 65.2
PSO675G2104 Papaver somniferum HOM05D007460 ORTHO05D009396 1.2e-87 327.8 399 48.6
AL4G47010 Arabidopsis lyrata HOM05D007460 ORTHO05D009396 2.7e-87 326.6 362 60.8
AUR62024876 Chenopodium quinoa HOM05D007460 ORTHO05D009396 4.6e-87 325.9 271 69.7
TPR.G17168 Trifolium pratense HOM05D007460 ORTHO05D009396 4.6e-87 325.9 266 67.7
AUR62030672 Chenopodium quinoa HOM05D007460 ORTHO05D009396 3.9e-86 322.8 274 67.9
Cc10_g12130 Coffea canephora HOM05D007460 ORTHO05D009396 1.9e-85 320.5 377 56.8
Os03g0131900 Oryza sativa ssp. japonica HOM05D007460 ORTHO05D009396 2.5e-85 320.1 384 54.9
MSTRG.28026 Avicennia marina HOM05D007460 ORTHO05D009396 3.1e-83 313.2 332 62.0
HPP92_022164 Vanilla planifolia HOM05D007460 ORTHO05D009396 3.1e-83 313.2 394 54.1
ATR0661G268 Amborella trichopoda HOM05D007460 ORTHO05D009396 4.3e-77 292.7 373 55.2
Atru.chr5.3484 Acer truncatum HOM05D007460 ORTHO05D009396 3.0e-62 243.4 259 66.4
Peaxi162Scf00170g00065 Petunia axillaris HOM05D007460 ORTHO05D009396 7.4e-61 238.8 264 52.3
Lj5A174T74 Lonicera japonica HOM05D007460 ORTHO05D009396 1.6e-55 221.1 319 45.5
SEGI_23478 Sequoiadendron giganteum HOM05D007460 ORTHO05D009396 3.6e-55 219.9 260 58.5
TAR625G1003 Trochodendron aralioides HOM05D007460 ORTHO05D009396 6.9e-51 205.7 152 66.4
Mapoly0129s0002 Marchantia polymorpha HOM05D007460 ORTHO05D009396 3.4e-50 203.4 310 50.0
FAN15G0864 Fragaria x ananassa HOM05D007460 ORTHO05D009396 1.1e-48 198.4 119 76.5
CBR_g4787 Chara braunii HOM05D007460 ORTHO05D009396 8.2e-44 182.2 266 50.4
Pp3c23_11730 Physcomitrium patens HOM05D002365 ORTHO05D002574 7.7e-42 175.6 258 52.7
SMO118G0269 Selaginella moellendorffii HOM05D007460 ORTHO05D009396 3.8e-41 173.3 283 48.1
AagrBONN_evm.TU.Sc2ySwM_117.2592 Anthoceros agrestis HOM05D007460 ORTHO05D009396 5.2e-38 162.9 258 49.6
Actinidia18020 Actinidia chinensis HOM05D007460 ORTHO05D009396 1.4e-35 154.8 157 52.9
Cre04.g231026 Chlamydomonas reinhardtii HOM05D007460 ORTHO05D009396 8.5e-33 145.6 254 46.9
TAR625G0583 Trochodendron aralioides HOM05D007460 ORTHO05D009396 2.0e-29 134.4 140 57.1
Actinidia18021 Actinidia chinensis HOM05D007460 ORTHO05D009396 1.2e-23 115.2 115 53.0
MCO01G545 Micromonas commoda HOM05D007460 ORTHO05D009396 6.1e-15 86.3 243 39.1
VMungo1309G1381 Vigna mungo HOM05D007460 ORTHO05D009396 3.3e-08 63.9 62 58.1


User provided reference genes

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