Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01309 Eucalyptus grandis HOM05D007387 ORTHO05D009321 9.7e-102 373.6 209 100.0
PGR142G2532 Punica granatum HOM05D007387 ORTHO05D009321 1.6e-27 127.1 212 49.1
Cpa.g.sc139.28 Carica papaya HOM05D007387 ORTHO05D009321 1.1e-20 104.4 57 82.5
Gohir.A04G124100 Gossypium hirsutum HOM05D007387 ORTHO05D009321 1.4e-20 104.0 59 79.7
Thecc.02G078400 Theobroma cacao HOM05D007387 ORTHO05D009321 2.5e-20 103.2 57 82.5
Gohir.D04G166200 Gossypium hirsutum HOM05D007387 ORTHO05D009321 4.2e-20 102.4 59 79.7
Gorai.012G154600 Gossypium raimondii HOM05D007387 ORTHO05D009321 4.2e-20 102.4 59 79.7
Duzib132G0100 Durio zibethinus HOM05D007387 ORTHO05D009321 2.1e-19 100.1 59 76.3
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 3.5e-19 99.4 57 75.4
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.3e-18 97.4 57 73.7
Phvul.011G041100 Phaseolus vulgaris HOM05D007387 ORTHO05D009321 1.3e-18 97.4 57 78.9
TWI31G1242 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 3.9e-18 95.9 58 72.4
VMungo1127G0459 Vigna mungo HOM05D007387 ORTHO05D009321 3.9e-18 95.9 57 77.2
Glyma.12G039000 Glycine max HOM05D007387 ORTHO05D009321 5.1e-18 95.5 57 75.4
Lj3g0012874 Lotus japonicus HOM05D007387 ORTHO05D009321 8.7e-18 94.7 59 72.9
Sabra04G0107500 Salix brachista HOM05D007387 ORTHO05D009321 8.7e-18 94.7 56 78.6
Atru.chr5.3107 Acer truncatum HOM05D007387 ORTHO05D009321 1.1e-17 94.4 57 75.4
Gohir.D12G030300 Gossypium hirsutum HOM05D007387 ORTHO05D009321 1.5e-17 94.0 60 71.7
Lalb_Chr03g0025431 Lupinus albus HOM05D007387 ORTHO05D009321 1.5e-17 94.0 56 75.0
Duzib248G1112 Durio zibethinus HOM05D007387 ORTHO05D009321 1.9e-17 93.6 59 74.6
Potri.004G160700 Populus trichocarpa HOM05D007387 ORTHO05D009321 2.5e-17 93.2 56 78.6
Ca_20916_v3 Cicer arietinum L. HOM05D007387 ORTHO05D009321 3.3e-17 92.8 59 72.9
Glyma.11G113100 Glycine max HOM05D007387 ORTHO05D009321 3.3e-17 92.8 57 73.7
Potri.009G121700 Populus trichocarpa HOM05D007387 ORTHO05D009321 3.3e-17 92.8 56 76.8
Actinidia00563 Actinidia chinensis HOM05D001785 ORTHO05D001933 4.3e-17 92.4 58 67.2
Gohir.A12G041900 Gossypium hirsutum HOM05D007387 ORTHO05D009321 4.3e-17 92.4 59 71.2
MD10G1066200 Malus domestica HOM05D007387 ORTHO05D009321 4.3e-17 92.4 211 42.2
arahy.Tifrunner.gnm1.ann1.WH0Y0U Arachis hypogaea HOM05D007387 ORTHO05D009321 5.7e-17 92.0 57 68.4
TWI79G0383 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 5.7e-17 92.0 57 71.9
FvH4_2g10040 Fragaria vesca HOM05D007387 ORTHO05D009321 7.4e-17 91.7 203 35.0
FAN24G0663 Fragaria x ananassa HOM05D007387 ORTHO05D009321 7.4e-17 91.7 203 35.0
Medtr4g071120 Medicago truncatula HOM05D007387 ORTHO05D009321 7.4e-17 91.7 56 75.0
Psat7g182600 Pisum sativum HOM05D007387 ORTHO05D009321 7.4e-17 91.7 56 73.2
Sopen01g052310 Solanum pennellii HOM05D007387 ORTHO05D009321 7.4e-17 91.7 55 70.9
Ciclev10029309m.g Citrus clementina HOM05D007387 ORTHO05D009321 9.6e-17 91.3 57 71.9
Dinv42018 Davidia involucrata HOM05D007387 ORTHO05D009321 9.6e-17 91.3 58 69.0
FAN27G1365 Fragaria x ananassa HOM05D007387 ORTHO05D009321 9.6e-17 91.3 191 36.6
Solyc01g110150.2 Solanum lycopersicum HOM05D007387 ORTHO05D009321 9.6e-17 91.3 55 70.9
Manes.11G087600 Manihot esculenta HOM05D007387 ORTHO05D009321 1.3e-16 90.9 56 73.2
Cfa005072 Carpinus fangiana HOM05D007387 ORTHO05D009321 1.6e-16 90.5 56 75.0
QL11p045571 Quercus lobata HOM05D007387 ORTHO05D009321 3.7e-16 89.4 56 69.6
PGSC0003DMG400030970 Solanum tuberosum HOM05D007387 ORTHO05D009321 3.7e-16 89.4 55 69.1
Prupe.8G088200 Prunus persica HOM05D007387 ORTHO05D009321 4.8e-16 89.0 204 41.2
RcHm_v2.0_Chr6g0266971 Rosa chinensis HOM05D007387 ORTHO05D009321 6.2e-16 88.6 57 70.2
Sabra09G0094000 Salix brachista HOM05D007387 ORTHO05D009321 6.2e-16 88.6 56 73.2
Actinidia11742 Actinidia chinensis HOM05D007387 ORTHO05D009321 8.2e-16 88.2 58 65.5
ClCG02G004690 Citrullus lanatus HOM05D007387 ORTHO05D009321 8.2e-16 88.2 57 73.7
MELO3C013435.2 Cucumis melo HOM05D007387 ORTHO05D009321 8.2e-16 88.2 57 73.7
CsaV3_7G000220 Cucumis sativus L. HOM05D007387 ORTHO05D009321 8.2e-16 88.2 57 73.7
FAN15G3112 Fragaria x ananassa HOM05D007387 ORTHO05D009321 8.2e-16 88.2 57 70.2
vmacro02067 Vaccinium macrocarpon HOM05D007387 ORTHO05D009321 1.4e-15 87.4 58 63.8
ECA236G2541 Erigeron canadensis HOM05D007387 ORTHO05D009321 1.8e-15 87.0 58 70.7
CAN.G170.83 Capsicum annuum HOM05D007387 ORTHO05D009321 3.1e-15 86.3 57 66.7
HanXRQChr16g0505141 Helianthus annuus HOM05D007387 ORTHO05D009321 4.0e-15 85.9 199 40.7
CiPaw.06G131100 Carya illinoinensis HOM05D007387 ORTHO05D009321 5.3e-15 85.5 59 67.8
TPR.G30501 Trifolium pratense HOM05D000711 ORTHO05D000545 5.3e-15 85.5 52 73.1
MD05G1058600 Malus domestica HOM05D007387 ORTHO05D009321 6.9e-15 85.1 202 43.1
Sed0000236 Sechium edule HOM05D007387 ORTHO05D009321 6.9e-15 85.1 57 71.9
Peaxi162Scf00003g00073 Petunia axillaris HOM05D007387 ORTHO05D009321 1.2e-14 84.3 54 68.5
Sed0010335 Sechium edule HOM05D007387 ORTHO05D009321 1.5e-14 84.0 57 70.2
TWI75G1034 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 1.5e-14 84.0 53 69.8
HanXRQChr04g0127721 Helianthus annuus HOM05D007387 ORTHO05D009321 2.0e-14 83.6 58 65.5
Lalb_Chr19g0138881 Lupinus albus HOM05D007387 ORTHO05D009321 3.4e-14 82.8 59 64.4
THA.LOC104807296 Tarenaya hassleriana HOM05D007387 ORTHO05D009321 3.4e-14 82.8 55 69.1
Lsat_1_v5_gn_7_91901 Lactuca sativa HOM05D007387 ORTHO05D009321 4.5e-14 82.4 57 66.7
CANSAT11G0211 Cannabis sativa HOM05D007387 ORTHO05D009321 7.6e-14 81.6 208 40.4
Oeu008575.1 Olea europaea HOM05D007387 ORTHO05D009321 7.6e-14 81.6 58 62.1
DCAR_003650 Daucus carota HOM05D007387 ORTHO05D009321 6.5e-13 78.6 58 65.5
Cc02_g17100 Coffea canephora HOM05D007387 ORTHO05D009321 2.5e-12 76.6 57 64.9
Sp7g32420 Schrenkiella parvula HOM05D007387 ORTHO05D009321 2.5e-12 76.6 55 63.6
Aa31LG2G15890 Aethionema arabicum HOM05D007387 ORTHO05D009321 4.2e-12 75.9 55 61.8
arahy.Tifrunner.gnm1.ann1.TWZZ0X Arachis hypogaea HOM05D007387 ORTHO05D009321 4.2e-12 75.9 171 45.6
Hma1.2p1_0066F.1_g035940 Hydrangea macrophylla HOM05D007387 ORTHO05D009321 4.2e-12 75.9 58 56.9
DCAR_009554 Daucus carota HOM05D007387 ORTHO05D009321 7.1e-12 75.1 58 63.8
Sc18g0005240 Simmondsia chinensis HOM05D007387 ORTHO05D009321 1.6e-11 73.9 54 61.1
Oeu055620.1 Olea europaea HOM05D007387 ORTHO05D009321 2.7e-11 73.2 56 55.4
CARHR106690 Cardamine hirsuta HOM05D007387 ORTHO05D009321 6.1e-11 72.0 56 60.7
A01p03860 Brassica napus HOM05D007387 ORTHO05D009321 7.9e-11 71.6 56 62.5
BcaNung04916 Brassica carinata HOM05D007387 ORTHO05D009321 2.3e-10 70.1 56 60.7
BcaNung04919 Brassica carinata HOM05D007387 ORTHO05D009321 3.0e-10 69.7 56 60.7
Thhalv10026183m.g Eutrema salsugineum HOM05D007387 ORTHO05D009321 3.0e-10 69.7 55 56.4
Carub.0007s0565 Capsella rubella HOM05D007387 ORTHO05D009321 3.3e-09 66.2 55 56.4
AL7G16570 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 5.7e-09 65.5 56 57.1
FAN15G0178 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.8e-08 63.2 45 64.4
AL3G52630 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 4.8e-08 62.4 54 59.3
AT4G34630 Arabidopsis thaliana HOM05D007387 ORTHO05D009321 4.8e-08 62.4 50 62.0
Actinidia12738 Actinidia chinensis HOM05D007387 ORTHO05D009321 8.2e-08 61.6 56 53.6
Actinidia27864 Actinidia chinensis HOM05D007387 ORTHO05D009321 8.2e-08 61.6 56 53.6
BcaNung00681 Brassica carinata HOM05D007387 ORTHO05D009321 8.2e-08 61.6 56 58.9
C01p04170 Brassica napus HOM05D007387 ORTHO05D009321 8.2e-08 61.6 56 58.9
BolC1t00405H Brassica oleracea HOM05D007387 ORTHO05D009321 8.2e-08 61.6 56 58.9
BraA01t00373Z Brassica rapa HOM05D007387 ORTHO05D009321 8.2e-08 61.6 56 58.9
FAN25G2925 Fragaria x ananassa HOM05D007387 ORTHO05D009321 1.1e-07 61.2 44 68.2
CARHR242940 Cardamine hirsuta HOM05D007387 ORTHO05D009321 2.4e-07 60.1 55 58.2
Peaxi162Scf00016g00025 Petunia axillaris HOM05D007387 ORTHO05D009321 2.4e-07 60.1 51 60.8
Carub.0003s3021 Capsella rubella HOM05D007387 ORTHO05D009321 9.0e-07 58.2 55 56.4
Haze_02310 Corylus avellana HOM05D007387 ORTHO05D009321 9.0e-07 58.2 37 78.4
FAN21G1657 Fragaria x ananassa HOM05D007387 ORTHO05D009321 9.0e-07 58.2 44 61.4
Ah.01g018920 Amaranthus hybridus HOM05D001785 ORTHO05D001933 2.0e-06 57.0 55 43.6
EL10Ac9g21673 Beta vulgaris HOM05D007387 ORTHO05D009321 2.6e-06 56.6 55 54.5


User provided reference genes

Program Settings