Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.7e-42 175.6 92 100.0
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 2.7e-24 115.2 95 68.4
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 2.6e-22 108.6 93 64.5
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 6.3e-21 104.0 92 62.0
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.4e-20 102.8 93 64.5
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 1.2e-19 99.8 92 59.8
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 3.5e-19 98.2 93 59.1
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 1.0e-18 96.7 93 59.1
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 5.0e-18 94.4 96 56.2
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 6.5e-18 94.0 92 57.6
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 1.1e-17 93.2 93 61.3
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 1.1e-17 93.2 92 53.3
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 1.5e-17 92.8 87 60.9
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 1.9e-17 92.4 92 56.5
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.2e-17 91.7 91 54.9
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 4.2e-17 91.3 87 58.6
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 5.5e-17 90.9 87 58.6
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 5.5e-17 90.9 93 53.8
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 5.5e-17 90.9 92 56.5
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 5.5e-17 90.9 95 56.8
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 5.5e-17 90.9 92 55.4
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.2e-16 89.7 94 55.3
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.2e-16 89.7 87 56.3
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.2e-16 89.7 87 56.3
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.6e-16 89.4 91 53.8
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 2.1e-16 89.0 92 57.6
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.1e-16 89.0 87 56.3
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.1e-16 89.0 87 57.5
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 2.1e-16 89.0 93 54.8
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 3.6e-16 88.2 87 60.9
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 3.6e-16 88.2 90 52.2
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 4.7e-16 87.8 94 56.4
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 4.7e-16 87.8 93 53.8
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.0e-15 86.7 97 54.6
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.0e-15 86.7 97 54.6
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 2.3e-15 85.5 97 56.7
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.0e-15 85.1 95 55.8
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 4.0e-15 84.7 92 54.3
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.0e-15 84.7 97 56.7
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 4.0e-15 84.7 94 52.1
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 6.8e-15 84.0 97 55.7
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 6.8e-15 84.0 96 52.1
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 8.8e-15 83.6 97 52.6
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 8.8e-15 83.6 92 50.0
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 8.8e-15 83.6 90 55.6
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 1.5e-14 82.8 92 55.4
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 2.0e-14 82.4 96 56.2
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 2.0e-14 82.4 93 49.5
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 3.4e-14 81.6 92 55.4
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 3.4e-14 81.6 88 51.1
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 4.4e-14 81.3 90 53.3
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 5.7e-14 80.9 93 53.8
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 5.7e-14 80.9 92 46.7
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 7.5e-14 80.5 92 51.1
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 1.7e-13 79.3 91 54.9
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 3.7e-13 78.2 92 50.0
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 4.9e-13 77.8 92 44.6
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 8.3e-13 77.0 96 50.0
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.8e-12 75.9 101 47.5
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 4.1e-12 74.7 87 55.2
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 5.4e-12 74.3 94 48.9
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 5.4e-12 74.3 84 54.8
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 9.2e-12 73.6 103 44.7
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 1.6e-11 72.8 95 48.4
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 2.0e-11 72.4 101 48.5
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 2.7e-11 72.0 95 43.2
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 3.5e-11 71.6 91 46.2
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 3.5e-11 71.6 98 45.9
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 4.5e-11 71.2 96 52.1
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.0e-10 70.1 61 59.0
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 1.0e-10 70.1 92 53.3
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 1.7e-10 69.3 93 50.5
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 2.3e-10 68.9 99 46.5
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 6.6e-10 67.4 94 45.7
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.5e-09 66.2 34 82.4
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.3e-09 64.7 59 57.6
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 5.6e-09 64.3 93 47.3
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 5.6e-09 64.3 61 52.5
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 7.3e-09 63.9 88 47.7
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 9.5e-09 63.5 91 41.8
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 1.2e-08 63.2 92 42.4
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 1.2e-08 63.2 93 45.2
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 1.6e-08 62.8 93 45.2
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 1.6e-08 62.8 93 45.2
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 1.6e-08 62.8 93 47.3
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 2.1e-08 62.4 82 41.5
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 2.1e-08 62.4 90 44.4
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 4.7e-08 61.2 93 45.2
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 6.1e-08 60.8 89 41.6
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 6.1e-08 60.8 96 43.8
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 6.1e-08 60.8 96 43.8
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 6.1e-08 60.8 38 71.1
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 8.0e-08 60.5 86 43.0
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 1.4e-07 59.7 96 42.7
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 1.4e-07 59.7 96 42.7
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 1.4e-07 59.7 93 44.1
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 1.8e-07 59.3 96 40.6
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 3.0e-07 58.5 103 38.8
Ah.01g019150 Amaranthus hybridus HOM05D001345 ORTHO05D001190 8.9e-07 57.0 71 49.3
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 8.9e-07 57.0 93 44.1
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 1.2e-06 56.6 88 38.6
BcaB03g11823 Brassica carinata HOM05D006691 ORTHO05D007620 1.5e-06 56.2 99 43.4
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 2.6e-06 55.5 92 37.0
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 3.4e-06 55.1 103 37.9
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 3.4e-06 55.1 93 40.9
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 3.4e-06 55.1 37 54.1
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 9.8e-06 53.5 73 43.8


User provided reference genes

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