Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 6.8e-138 494.2 288 100.0
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 6.9e-74 281.6 304 57.6
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 5.0e-72 275.4 293 61.4
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 5.7e-68 261.9 302 50.3
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 4.1e-66 255.8 302 57.3
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 6.9e-66 255.0 335 47.8
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 5.9e-65 251.9 301 53.5
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.3e-64 250.8 298 49.0
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 2.2e-64 250.0 296 50.3
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 6.5e-64 248.4 297 48.8
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 8.5e-64 248.1 293 57.0
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 1.4e-63 247.3 304 50.0
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 2.5e-63 246.5 325 45.8
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 5.5e-63 245.4 301 49.5
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 1.2e-62 244.2 307 59.6
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 2.1e-62 243.4 291 56.7
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 2.7e-62 243.0 214 61.2
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 2.7e-62 243.0 307 47.6
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 6.1e-62 241.9 311 50.5
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 1.4e-61 240.7 329 48.0
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 1.8e-61 240.4 303 54.8
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 2.3e-61 240.0 307 50.8
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 3.0e-61 239.6 304 48.7
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 3.0e-61 239.6 296 57.8
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 3.9e-61 239.2 307 53.7
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 5.2e-61 238.8 305 46.9
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 6.7e-61 238.4 299 59.9
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 6.7e-61 238.4 216 60.6
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 2.0e-60 236.9 313 49.8
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 2.6e-60 236.5 298 50.0
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 5.7e-60 235.3 322 45.7
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 7.4e-60 235.0 295 48.8
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 7.4e-60 235.0 300 47.3
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 2.2e-59 233.4 305 50.8
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 3.7e-59 232.6 300 48.3
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 3.7e-59 232.6 324 46.6
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 4.8e-59 232.3 308 59.4
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 4.8e-59 232.3 298 53.0
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 4.1e-58 229.2 325 47.1
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 4.1e-58 229.2 302 46.7
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 1.6e-57 227.3 207 59.9
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 2.0e-57 226.9 312 49.7
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 3.5e-57 226.1 319 46.1
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 7.7e-57 224.9 298 47.7
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 2.2e-56 223.4 323 46.7
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 8.5e-56 221.5 299 45.8
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 1.9e-55 220.3 308 51.9
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 2.5e-55 219.9 310 44.2
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 3.2e-55 219.5 303 56.8
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 7.2e-55 218.4 211 55.5
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 3.6e-54 216.1 305 45.9
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 3.6e-54 216.1 298 45.0
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 3.6e-54 216.1 321 46.4
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 4.7e-54 215.7 298 45.0
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 6.1e-54 215.3 310 52.9
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 8.0e-54 214.9 313 45.0
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 2.3e-53 213.4 341 41.6
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 2.3e-53 213.4 299 48.2
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 4.0e-53 212.6 325 44.3
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 2.6e-52 209.9 219 58.0
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 4.4e-52 209.1 313 44.4
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 9.7e-52 208.0 306 42.5
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 2.2e-51 206.8 219 54.3
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 2.8e-51 206.5 313 43.8
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 3.7e-51 206.1 319 41.4
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 8.2e-51 204.9 301 43.2
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 1.8e-50 203.8 306 43.5
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 5.3e-50 202.2 296 42.6
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 7.0e-50 201.8 311 45.7
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 7.0e-50 201.8 302 43.7
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 1.2e-49 201.1 313 40.6
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 1.2e-49 201.1 221 53.4
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 1.6e-49 200.7 320 40.0
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 2.0e-49 200.3 314 41.1
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 2.0e-49 200.3 294 41.8
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 2.0e-49 200.3 294 41.8
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 3.5e-49 199.5 320 40.0
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 2.2e-48 196.8 294 43.5
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 3.8e-48 196.1 299 44.5
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 3.8e-48 196.1 299 44.5
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 6.5e-48 195.3 296 41.9
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 2.5e-47 193.4 312 44.9
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 3.2e-47 193.0 311 41.5
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 7.2e-47 191.8 298 42.3
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 1.2e-46 191.0 300 42.0
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 1.2e-46 191.0 307 44.3
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 2.7e-46 189.9 310 45.2
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 3.6e-46 189.5 295 42.7
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 4.7e-46 189.1 305 43.6
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 6.1e-46 188.7 213 50.7
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 8.0e-46 188.3 307 41.0
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 1.0e-45 188.0 303 42.9
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 1.4e-45 187.6 295 41.7
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 2.3e-45 186.8 305 42.3
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 3.0e-45 186.4 307 44.6
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 6.8e-45 185.3 298 44.3
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 1.2e-44 184.5 302 45.0
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 2.0e-44 183.7 298 43.3
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 2.6e-44 183.3 293 42.3
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 2.6e-44 183.3 300 41.0
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 3.4e-44 183.0 218 52.3
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 3.4e-44 183.0 306 40.5
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 5.7e-44 182.2 301 42.2
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 7.5e-44 181.8 216 54.2
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 1.7e-43 180.6 301 41.2
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 3.7e-43 179.5 288 44.1
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 4.8e-43 179.1 296 41.9
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 6.3e-43 178.7 310 38.1
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 6.3e-43 178.7 310 38.1
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 6.3e-43 178.7 310 38.1
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 8.3e-43 178.3 300 42.7
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 1.4e-42 177.6 308 39.9
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 1.8e-42 177.2 303 40.9
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 3.1e-42 176.4 305 42.0
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 4.1e-42 176.0 303 40.3
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 7.0e-42 175.3 299 39.8
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 1.6e-41 174.1 304 40.8
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 1.6e-38 164.1 323 36.2
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 3.6e-38 162.9 297 39.4
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 1.4e-37 161.0 293 38.9
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 8.8e-37 158.3 293 39.2
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 2.6e-36 156.8 294 39.1
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.3e-35 154.5 320 35.6
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 8.3e-35 151.8 221 40.3
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 1.5e-31 141.0 270 38.5
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 5.6e-31 139.0 207 43.0
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 3.6e-30 136.3 267 46.8
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 5.2e-29 132.5 235 39.6
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 1.1e-26 124.8 296 35.5
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 1.1e-26 124.8 296 35.5
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 5.4e-26 122.5 146 56.2
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 2.0e-25 120.6 237 35.9
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 1.7e-24 117.5 156 47.4
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 6.6e-24 115.5 299 35.1
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 7.5e-20 102.1 161 42.2
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 3.7e-19 99.8 155 38.7
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 6.4e-19 99.0 92 63.0
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.9e-18 97.4 364 27.7
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.9e-18 97.4 254 33.9
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.1e-18 96.3 253 31.2
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 8.6e-16 88.6 152 38.2
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.2e-14 82.4 360 26.9
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 8.1e-14 82.0 372 23.4
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 1.2e-12 78.2 121 40.5
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 5.8e-12 75.9 229 30.6
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 1.3e-11 74.7 339 26.3
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 2.2e-11 73.9 132 44.7
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 2.1e-09 67.4 84 48.8
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 1.3e-08 64.7 56 66.1
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 5.1e-08 62.8 71 46.5
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.9e-07 60.8 42 71.4
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.1e-06 57.4 237 25.7
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 2.1e-06 57.4 158 31.6
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 2.1e-06 57.4 207 30.0
FAN15G3283 Fragaria x ananassa HOM05D001401 ORTHO05D006368 3.6e-06 56.6 31 77.4
QL11p040051 Quercus lobata HOM05D001401 ORTHO05D006368 8.1e-06 55.5 28 89.3


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