Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 7.4e-121 437.2 216 100.0
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.6e-75 286.6 217 66.8
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 2.6e-73 279.3 216 65.7
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 5.7e-73 278.1 216 64.4
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.7e-72 276.6 217 65.4
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 3.7e-72 275.4 216 64.4
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 8.3e-72 274.2 218 66.1
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 2.4e-71 272.7 218 64.7
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 3.2e-71 272.3 218 65.6
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.1e-71 271.9 217 65.0
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 2.3e-69 266.2 217 63.1
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 2.3e-69 266.2 217 61.3
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 3.0e-69 265.8 218 62.4
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 3.9e-69 265.4 221 62.9
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 6.6e-69 264.6 219 63.9
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 8.6e-69 264.2 214 64.0
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.5e-68 263.5 217 62.2
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 5.6e-68 261.5 221 63.3
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 5.6e-68 261.5 219 63.0
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 7.3e-68 261.2 165 73.9
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 7.3e-68 261.2 217 62.2
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.2e-67 260.4 179 69.3
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 1.2e-67 260.4 216 63.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 1.6e-67 260.0 179 69.3
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.8e-66 256.5 172 70.3
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.8e-66 256.5 175 69.7
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 2.3e-66 256.1 225 60.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 6.8e-66 254.6 239 57.7
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 6.8e-66 254.6 211 62.1
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 1.5e-65 253.4 216 59.7
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.5e-65 253.4 199 65.8
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.5e-65 253.4 196 64.3
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 4.4e-65 251.9 215 59.5
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 5.8e-65 251.5 171 70.8
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 7.5e-65 251.1 216 60.6
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 9.8e-65 250.8 216 59.7
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.7e-64 248.8 218 59.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 3.7e-64 248.8 217 59.4
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 8.3e-64 247.7 163 72.4
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 8.3e-64 247.7 216 59.3
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.4e-63 246.9 218 60.1
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 1.9e-63 246.5 216 60.2
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 4.1e-63 245.4 190 65.8
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 4.1e-63 245.4 190 66.8
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 7.0e-63 244.6 173 67.1
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 9.2e-63 244.2 192 63.5
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 9.2e-63 244.2 216 59.3
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 9.2e-63 244.2 208 61.1
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.2e-62 243.8 205 60.5
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 1.6e-62 243.4 178 65.7
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.7e-62 242.7 188 63.3
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 2.7e-62 242.7 214 57.9
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 4.6e-62 241.9 218 59.6
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 6.0e-62 241.5 208 59.6
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.0e-61 240.7 216 58.8
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.3e-61 239.6 179 63.1
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 6.6e-61 238.0 216 56.5
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 8.6e-61 237.7 182 62.6
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.1e-60 237.3 179 63.7
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.5e-60 236.9 191 62.8
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 1.5e-60 236.9 161 68.3
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.3e-60 235.7 179 63.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 5.6e-60 235.0 161 68.3
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 9.5e-60 234.2 198 61.1
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.2e-59 233.8 243 53.1
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 2.1e-59 233.0 176 65.3
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 2.8e-59 232.6 217 57.6
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 4.7e-59 231.9 183 59.0
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 6.2e-59 231.5 186 63.4
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 6.2e-59 231.5 212 56.1
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 6.2e-59 231.5 184 60.9
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 8.1e-59 231.1 170 64.1
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.8e-58 229.9 188 64.4
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.8e-58 229.9 182 58.8
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.3e-58 229.6 225 56.9
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 2.3e-58 229.6 204 59.3
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 5.2e-58 228.4 171 66.1
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 6.8e-58 228.0 168 66.1
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.2e-57 227.3 188 61.7
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.5e-57 226.9 180 63.9
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.5e-57 226.9 180 63.9
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.5e-57 226.9 180 63.9
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 2.0e-57 226.5 182 63.2
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 2.6e-57 226.1 179 63.7
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 2.6e-57 226.1 218 55.0
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 3.4e-57 225.7 170 65.3
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.4e-57 225.7 170 63.5
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 7.5e-57 224.6 180 63.3
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.2e-56 223.0 181 63.5
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 2.2e-56 223.0 197 58.4
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 2.9e-56 222.6 180 62.2
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 6.4e-56 221.5 167 62.9
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.4e-55 220.3 180 61.7
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.5e-54 215.7 167 61.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 6.0e-54 214.9 209 53.6
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 6.0e-54 214.9 166 63.9
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 6.0e-54 214.9 177 59.3
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 3.3e-52 209.1 196 54.1
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 4.3e-52 208.8 150 66.0
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 1.6e-51 206.8 215 52.6
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 3.1e-50 202.6 176 58.0
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 5.2e-50 201.8 196 52.6
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.6e-38 163.7 236 42.4
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.0e-37 161.0 199 45.2
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 6.6e-37 158.3 208 45.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 2.5e-36 156.4 242 42.1
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 6.4e-32 141.7 208 40.9
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.1e-31 141.0 131 61.8
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.4e-31 140.6 158 50.6
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 2.4e-31 139.8 192 41.1
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 6.2e-27 125.2 111 61.3
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 4.9e-24 115.5 89 59.6
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.1e-22 110.2 211 35.1
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 3.5e-22 109.4 165 41.2
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.0e-21 106.3 194 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 5.1e-21 105.5 203 33.5
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.1e-20 104.4 181 33.7
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 6.5e-16 88.6 175 33.1
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 1.1e-15 87.8 101 45.5
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.7e-08 63.9 103 35.0
Sabra04G0096800 Salix brachista HOM05D000546 ORTHO05D000398 3.6e-06 56.2 45 55.6


User provided reference genes

Program Settings