Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 7.2e-255 883.6 518 100.0
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 2.4e-170 602.8 475 70.7
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 3.2e-170 602.4 474 70.9
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 7.1e-170 601.3 478 67.2
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 9.3e-170 600.9 475 67.6
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.6e-169 600.1 477 67.9
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.5e-164 583.6 463 68.3
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 2.9e-163 579.3 475 69.1
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 1.4e-162 577.0 457 71.1
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 3.2e-162 575.9 459 70.4
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.2e-161 573.9 457 67.4
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.8e-160 570.1 459 70.6
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 3.7e-158 562.4 457 65.9
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.1e-157 560.8 456 64.9
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.1e-157 560.8 457 69.4
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 1.8e-157 560.1 520 64.2
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 3.1e-157 559.3 478 63.8
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.2e-156 557.4 444 71.4
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.5e-156 557.0 457 69.4
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 2.6e-156 556.2 457 69.4
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 7.6e-156 554.7 477 63.3
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 2.2e-155 553.1 477 63.7
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 3.8e-155 552.4 518 63.5
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 3.8e-155 552.4 454 68.9
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 1.3e-152 543.9 410 70.0
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 3.0e-152 542.7 476 61.8
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 3.9e-152 542.3 561 57.4
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 3.9e-152 542.3 477 62.3
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 5.1e-152 542.0 457 63.9
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 6.7e-152 541.6 411 70.3
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 1.1e-151 540.8 457 64.1
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.5e-151 540.4 517 60.2
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 7.4e-151 538.1 408 67.6
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 2.1e-150 536.6 517 59.4
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 2.8e-150 536.2 490 61.4
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.8e-149 533.5 471 62.2
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 6.9e-149 531.6 482 64.7
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 9.0e-149 531.2 456 63.8
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.2e-148 530.8 502 62.9
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.5e-148 530.4 410 68.8
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 2.6e-148 529.6 478 61.3
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 4.5e-148 528.9 457 63.0
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 5.9e-148 528.5 519 60.1
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.2e-147 526.6 411 67.6
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.1e-146 524.2 411 67.2
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 2.5e-146 523.1 406 68.2
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 7.2e-146 521.5 479 61.2
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.2e-145 520.8 415 66.5
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 1.2e-145 520.8 475 64.0
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.6e-145 520.4 458 63.1
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 8.7e-144 514.6 480 65.0
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.1e-143 514.2 502 59.2
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 1.1e-143 514.2 475 64.0
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 1.5e-143 513.8 477 62.1
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 1.5e-143 513.8 412 66.0
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 2.5e-143 513.1 519 59.0
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.3e-143 512.7 502 59.2
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 7.4e-143 511.5 409 65.0
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 7.4e-143 511.5 473 62.2
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 2.8e-142 509.6 410 63.9
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 8.2e-142 508.1 409 64.8
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 8.2e-142 508.1 458 59.2
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 1.1e-141 507.7 407 65.4
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 1.4e-141 507.3 459 65.1
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 1.4e-141 507.3 516 57.0
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 2.4e-141 506.5 451 62.3
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.1e-141 506.1 411 66.4
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 5.3e-141 505.4 477 60.0
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 5.3e-141 505.4 477 60.0
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.3e-141 505.4 411 66.7
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 1.2e-140 504.2 477 63.1
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 1.2e-140 504.2 460 62.4
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 2.0e-140 503.4 503 61.8
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.6e-140 503.1 459 62.7
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 2.6e-140 503.1 479 63.5
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.7e-139 500.4 476 59.5
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 6.5e-139 498.4 471 59.7
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 8.5e-139 498.0 487 61.8
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 8.5e-139 498.0 409 64.5
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 1.9e-138 496.9 476 58.6
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 4.2e-138 495.7 491 61.3
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 9.4e-138 494.6 460 59.8
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 9.4e-138 494.6 460 58.0
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.6e-137 493.8 518 54.4
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 2.1e-137 493.4 497 57.5
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 3.6e-137 492.7 458 59.4
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 7.9e-137 491.5 388 66.8
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 3.9e-136 489.2 404 62.9
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 6.7e-136 488.4 475 58.1
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 8.8e-136 488.0 405 64.7
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 7.4e-135 485.0 468 58.1
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 7.4e-135 485.0 468 58.1
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 9.7e-135 484.6 458 57.6
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 2.8e-134 483.0 409 61.9
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 8.2e-134 481.5 389 65.8
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 5.3e-133 478.8 474 56.5
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 1.3e-131 474.2 426 61.5
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.7e-131 473.8 475 57.1
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 2.1e-129 466.8 405 63.7
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 1.8e-128 463.8 410 61.2
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 1.8e-128 463.8 409 62.8
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 8.8e-128 461.5 392 62.8
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 2.6e-127 459.9 387 64.3
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 4.8e-126 455.7 473 55.4
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.4e-125 454.1 403 63.0
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 8.5e-123 444.9 364 67.0
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.9e-122 443.7 383 60.3
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 5.3e-117 425.6 519 58.0
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 4.5e-116 422.5 355 64.8
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 1.7e-115 420.6 401 62.3
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.4e-104 384.4 334 63.2
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 1.4e-104 384.4 488 45.9
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.3e-102 377.9 315 61.0
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 2.7e-100 370.2 439 48.5
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 5.6e-90 335.9 491 41.1
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.2e-89 334.7 277 64.6
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.6e-89 334.3 277 64.6
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 3.1e-88 330.1 290 58.6
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 7.5e-87 325.5 460 41.5
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 1.6e-81 307.8 262 68.7
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.9e-78 297.0 255 62.4
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 1.1e-77 295.0 299 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 2.1e-76 290.8 414 42.8
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.1e-72 278.5 231 61.9
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 5.4e-69 266.2 342 51.2
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 7.6e-63 245.7 574 34.5
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.1e-57 227.6 308 48.4
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 7.6e-55 219.2 175 65.7
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 2.6e-47 194.1 471 35.2
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 3.4e-47 193.7 238 65.1
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 4.9e-46 189.9 150 66.0
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 1.3e-43 181.8 141 68.1
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 3.5e-36 157.1 159 56.6
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.4e-32 145.2 180 56.1
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 9.0e-32 142.5 107 68.2
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 2.7e-28 131.0 106 67.0
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 2.7e-28 131.0 106 67.0
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 6.7e-27 126.3 126 55.6
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 2.2e-25 121.3 153 61.4
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 1.9e-21 108.2 198 45.5
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.4e-16 91.3 78 64.1
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 2.4e-16 91.3 98 55.1
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 1.5e-15 88.6 109 50.5
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 7.7e-15 86.3 96 52.1
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.0e-14 85.9 122 45.1
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 3.8e-14 84.0 74 60.8
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 5.0e-14 83.6 56 67.9
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 7.2e-13 79.7 154 37.7
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 4.7e-12 77.0 82 51.2
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.4e-08 64.7 152 36.8
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 2.0e-07 61.6 175 27.4
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.0e-06 59.3 148 33.1
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 3.8e-06 57.4 137 37.2


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