Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.0e-88 330.1 173 100.0
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 2.7e-73 278.9 173 82.7
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 4.6e-73 278.1 173 83.8
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 4.6e-73 278.1 173 82.1
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 4.6e-73 278.1 173 83.8
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 7.8e-73 277.3 173 83.8
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 2.3e-72 275.8 173 83.8
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 6.6e-72 274.2 173 82.7
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.9e-71 272.7 173 82.7
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 3.3e-71 271.9 172 83.1
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 4.3e-71 271.6 173 80.9
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 7.3e-71 270.8 173 83.8
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 9.6e-71 270.4 173 83.2
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 9.6e-71 270.4 173 83.2
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.3e-70 270.0 173 80.9
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 6.2e-70 267.7 173 79.2
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 6.2e-70 267.7 173 81.5
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 8.1e-70 267.3 173 80.3
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.1e-69 266.9 173 82.7
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 1.8e-69 266.2 173 80.9
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 3.1e-69 265.4 173 82.1
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 6.9e-69 264.2 173 79.8
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 1.2e-68 263.5 173 80.9
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 2.6e-68 262.3 173 77.5
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 3.4e-68 261.9 173 78.6
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 4.5e-68 261.5 173 80.3
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 7.6e-68 260.8 173 80.3
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 9.9e-68 260.4 173 78.6
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 9.9e-68 260.4 175 79.4
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 1.3e-67 260.0 173 79.8
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 2.2e-67 259.2 166 80.1
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 3.8e-67 258.5 175 79.4
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 4.9e-67 258.1 173 76.9
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 8.4e-67 257.3 175 77.7
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 8.4e-67 257.3 175 77.7
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 1.9e-66 256.1 173 78.0
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 3.2e-66 255.4 182 76.9
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 4.2e-66 255.0 173 78.6
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 4.2e-66 255.0 173 78.6
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 4.2e-66 255.0 173 78.6
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 9.3e-66 253.8 194 70.6
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.6e-65 253.1 174 77.6
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.6e-65 253.1 173 77.5
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 4.6e-65 251.5 167 77.8
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 6.0e-65 251.1 173 75.1
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 7.9e-65 250.8 181 74.6
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 7.9e-65 250.8 170 78.2
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 1.3e-64 250.0 162 80.9
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 3.0e-64 248.8 173 75.7
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 2.5e-63 245.7 173 75.1
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 2.5e-63 245.7 173 75.1
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.3e-63 245.4 166 75.9
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 1.3e-62 243.4 173 74.0
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.3e-62 243.4 173 74.0
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.6e-62 243.0 150 80.7
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 3.7e-62 241.9 173 74.0
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 4.8e-62 241.5 173 74.6
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 6.2e-62 241.1 173 74.6
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 8.1e-62 240.7 173 74.6
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 1.1e-61 240.4 173 72.8
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 1.8e-61 239.6 173 73.4
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 3.1e-61 238.8 173 72.8
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 5.3e-61 238.0 173 73.4
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.2e-60 236.9 173 73.4
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 1.5e-60 236.5 173 72.3
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.5e-60 236.5 173 72.8
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 1.5e-60 236.5 144 83.3
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 3.4e-60 235.3 149 81.9
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 4.5e-60 235.0 173 71.1
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 5.8e-60 234.6 173 72.3
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 7.6e-60 234.2 173 71.7
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 7.6e-60 234.2 173 71.1
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 1.0e-59 233.8 173 71.7
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.0e-59 233.8 168 75.0
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 3.8e-59 231.9 144 81.2
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 7.1e-58 227.6 173 68.2
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 9.3e-58 227.3 173 69.4
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 1.6e-57 226.5 145 81.4
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 1.0e-56 223.8 144 81.2
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 3.9e-56 221.9 150 78.7
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.5e-55 219.9 173 71.7
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.8e-53 213.0 144 79.2
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.1e-53 211.8 173 67.6
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 5.3e-53 211.5 149 75.2
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 7.6e-52 207.6 173 67.1
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 6.5e-51 204.5 173 67.1
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 8.4e-51 204.1 150 72.0
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 8.4e-51 204.1 143 76.9
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 2.5e-50 202.6 169 60.4
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 4.2e-50 201.8 144 73.6
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 5.5e-50 201.4 165 60.6
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 7.1e-50 201.1 168 63.1
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 1.2e-49 200.3 144 73.6
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.9e-47 193.0 169 58.0
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.8e-45 186.4 173 62.4
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 4.6e-41 171.8 170 55.3
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 7.9e-41 171.0 111 78.4
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 7.4e-39 164.5 114 76.3
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 9.7e-39 164.1 120 72.5
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.4e-37 160.2 144 63.2
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.4e-37 160.2 115 68.7
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.5e-36 156.8 139 67.6
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 7.2e-34 147.9 123 66.7
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 1.2e-33 147.1 118 66.9
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.8e-29 133.3 99 71.7
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 7.0e-29 131.3 164 54.3
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 3.8e-27 125.6 120 60.0
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 5.0e-27 125.2 89 73.0
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.1e-26 124.0 86 73.3
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.1e-26 124.0 95 71.6
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.9e-26 123.2 95 68.4
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 3.2e-26 122.5 171 39.2
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 4.2e-26 122.1 99 67.7
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 7.2e-26 121.3 103 67.0
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 6.7e-24 114.8 105 61.9
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 1.5e-23 113.6 159 40.3
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 5.7e-23 111.7 86 73.3
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 2.8e-22 109.4 182 39.6
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.7e-19 100.1 71 74.6
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 9.4e-18 94.4 105 56.2
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 8.0e-17 91.3 114 51.8
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.0e-15 86.7 58 77.6
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.1e-13 80.9 57 73.7
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 7.0e-13 78.2 63 68.3
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 1.2e-12 77.4 86 52.3
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 4.5e-12 75.5 58 69.0
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 2.2e-11 73.2 41 85.4
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 2.5e-10 69.7 47 72.3
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 3.6e-09 65.9 59 57.6


User provided reference genes

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