Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 3.9e-63 244.6 119 100.0
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 3.1e-52 208.4 116 86.2
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.9e-52 207.2 116 85.3
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.9e-52 207.2 116 85.3
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 6.9e-52 207.2 116 85.3
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 6.9e-52 207.2 116 84.5
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 9.0e-52 206.8 116 85.3
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 1.5e-51 206.1 116 84.5
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 1.5e-51 206.1 113 85.8
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 2.0e-51 205.7 116 86.2
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.0e-51 205.7 116 85.3
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.4e-51 204.9 116 84.5
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 3.4e-51 204.9 113 84.1
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 5.8e-51 204.1 116 82.8
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 7.6e-51 203.8 116 84.5
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 9.9e-51 203.4 113 86.7
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.3e-50 203.0 113 85.0
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 1.7e-50 202.6 113 84.1
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 1.7e-50 202.6 116 83.6
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 2.2e-50 202.2 116 83.6
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 2.9e-50 201.8 116 82.8
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 4.9e-50 201.1 116 84.5
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 4.9e-50 201.1 119 79.0
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 4.9e-50 201.1 115 84.3
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 6.4e-50 200.7 116 83.6
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 6.4e-50 200.7 113 82.3
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 6.4e-50 200.7 113 84.1
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 8.4e-50 200.3 115 81.7
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 1.1e-49 199.9 116 81.9
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 1.1e-49 199.9 116 82.8
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.9e-49 199.1 113 81.4
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 3.2e-49 198.4 116 81.0
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 4.2e-49 198.0 113 82.3
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 4.2e-49 198.0 113 81.4
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 7.1e-49 197.2 113 83.2
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 1.2e-48 196.4 116 78.4
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 1.6e-48 196.1 113 81.4
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.1e-48 195.7 113 82.3
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.1e-48 195.7 116 79.3
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.7e-48 195.3 113 81.4
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 2.7e-48 195.3 113 80.5
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 3.5e-48 194.9 116 77.6
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 7.9e-48 193.7 121 79.3
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 3.0e-47 191.8 116 77.6
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 5.1e-47 191.0 116 77.6
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 8.7e-47 190.3 116 76.7
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.5e-46 188.7 106 85.8
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 2.5e-46 188.7 116 75.9
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 2.5e-46 188.7 128 75.0
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 4.3e-46 188.0 116 75.9
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 7.3e-46 187.2 116 75.9
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 7.3e-46 187.2 116 75.9
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 2.8e-45 185.3 116 75.9
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 3.6e-45 184.9 116 74.1
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 6.2e-45 184.1 116 74.1
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 8.1e-45 183.7 116 74.1
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 1.4e-44 183.0 115 74.8
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.4e-44 183.0 105 80.0
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.8e-44 182.6 116 74.1
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.4e-44 182.2 116 73.3
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 4.0e-44 181.4 107 76.6
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 5.3e-44 181.0 116 72.4
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 5.3e-44 181.0 109 76.1
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.2e-43 179.9 100 81.0
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.6e-43 178.7 116 72.4
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 7.6e-43 177.2 116 71.6
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 7.6e-43 177.2 116 70.7
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 2.2e-42 175.6 164 57.9
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 3.8e-42 174.9 105 77.1
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 4.9e-42 174.5 105 76.2
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 4.9e-42 174.5 105 76.2
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 4.9e-42 174.5 116 70.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 8.4e-42 173.7 116 67.2
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.1e-41 173.3 101 78.2
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.2e-41 171.8 98 81.6
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.6e-40 169.5 117 67.5
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.1e-40 169.1 105 76.2
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 4.6e-40 167.9 117 66.7
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 2.5e-38 162.2 113 63.7
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 5.6e-38 161.0 92 79.3
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 7.4e-38 160.6 109 66.1
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.1e-37 159.1 108 67.6
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 6.9e-36 154.1 111 67.6
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 2.1e-32 142.5 81 81.5
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.0e-31 140.2 84 76.2
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 1.3e-31 139.8 110 59.1
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 7.4e-30 134.0 113 51.3
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 6.9e-28 127.5 111 55.9
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 2.5e-25 119.0 70 81.4
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 2.7e-24 115.5 102 53.9
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 3.5e-24 115.2 116 57.8
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.3e-23 113.2 111 51.4
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.1e-23 111.3 116 55.2
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 4.1e-20 101.7 110 45.5
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 9.0e-20 100.5 109 45.9
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.2e-13 79.3 47 78.7
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 8.2e-13 77.4 64 56.2
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.2e-11 73.6 73 47.9
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 1.5e-11 73.2 47 63.8
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 7.7e-11 70.9 68 51.5
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 7.2e-09 64.3 89 38.2
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 3.0e-07 58.9 40 75.0
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 6.7e-07 57.8 34 61.8
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 2.0e-06 56.2 36 63.9


User provided reference genes

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