Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 0.0e+00 1180.6 577 100.0
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 2.4e-126 456.8 594 44.1
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 3.8e-124 449.5 600 43.7
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 4.7e-122 442.6 577 45.1
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 8.9e-121 438.3 616 43.0
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 3.4e-120 436.4 580 43.8
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.4e-120 436.4 588 43.9
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 5.8e-120 435.6 593 42.8
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 2.3e-116 423.7 591 41.8
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 3.0e-116 423.3 601 42.4
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.9e-116 422.9 591 41.8
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 5.6e-115 419.1 586 43.0
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 1.2e-112 411.4 582 41.4
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 5.8e-112 409.1 576 41.7
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.5e-112 408.7 621 40.1
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 1.3e-111 407.9 584 42.6
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 3.7e-111 406.4 589 43.8
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.4e-111 405.6 580 41.6
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 5.4e-110 402.5 587 42.4
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.0e-110 402.1 580 41.0
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 9.2e-110 401.7 573 42.1
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 4.6e-109 399.4 583 42.7
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 6.0e-109 399.1 595 40.5
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 8.6e-108 395.2 581 42.5
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 1.1e-107 394.8 594 41.1
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 1.2e-106 391.3 603 39.8
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.1e-106 390.6 607 39.4
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 4.7e-106 389.4 607 39.5
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 4.0e-105 386.3 593 40.6
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 5.8e-104 382.5 565 41.1
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 2.9e-103 380.2 587 40.0
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 1.6e-101 374.4 588 39.8
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.5e-101 373.2 584 40.6
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 6.0e-101 372.5 580 39.1
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 3.9e-100 369.8 593 38.1
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 8.6e-100 368.6 591 39.3
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 4.3e-99 366.3 597 39.7
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 7.3e-99 365.5 575 38.6
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 1.6e-98 364.4 562 38.8
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.6e-98 364.4 571 38.2
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 2.1e-98 364.0 577 39.7
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 3.6e-98 363.2 593 38.8
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 8.1e-98 362.1 570 37.9
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 1.1e-97 361.7 579 38.3
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 1.1e-97 361.7 595 39.0
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 1.4e-97 361.3 555 38.4
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 3.1e-97 360.1 591 39.3
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 4.0e-97 359.8 584 38.2
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 6.8e-97 359.0 584 39.6
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 8.9e-97 358.6 570 38.9
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 2.6e-96 357.1 598 35.8
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 2.6e-96 357.1 570 39.8
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 3.4e-96 356.7 593 37.4
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 4.4e-96 356.3 595 38.0
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 8.4e-95 352.1 555 38.4
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 2.4e-94 350.5 589 37.9
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.2e-94 350.1 603 39.1
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 2.1e-93 347.4 608 39.5
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 2.7e-93 347.1 599 37.1
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 3.5e-93 346.7 598 37.1
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 1.0e-92 345.1 582 37.8
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 1.0e-92 345.1 603 36.3
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 5.1e-92 342.8 580 37.6
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 6.6e-92 342.4 593 38.8
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 1.1e-91 341.7 587 38.7
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 2.8e-90 337.0 620 38.5
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 6.2e-90 335.9 517 39.3
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 1.1e-89 335.1 597 35.8
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 1.8e-89 334.3 415 45.3
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 1.5e-88 331.3 574 38.3
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 8.4e-87 325.5 450 42.0
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 7.1e-86 322.4 621 37.4
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 4.6e-85 319.7 474 40.1
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 5.1e-84 316.2 575 37.4
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 5.6e-83 312.8 487 38.8
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 3.6e-82 310.1 614 36.2
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 9.9e-80 302.0 458 38.6
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 3.8e-79 300.1 615 36.4
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 3.0e-76 290.4 574 35.2
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 1.5e-75 288.1 437 40.3
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 9.9e-72 275.4 429 40.8
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 8.4e-71 272.3 500 37.2
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.4e-70 271.6 582 33.2
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 1.9e-70 271.2 470 37.2
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 4.6e-69 266.5 588 34.2
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 1.0e-68 265.4 561 32.3
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 1.3e-68 265.0 541 33.6
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 1.3e-66 258.5 574 32.6
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 1.5e-64 251.5 605 32.6
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 8.4e-63 245.7 351 40.7
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 3.2e-62 243.8 589 32.3
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 4.2e-62 243.4 589 32.3
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 7.9e-61 239.2 608 32.4
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 6.3e-58 229.6 577 32.2
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 1.5e-56 224.9 390 37.4
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 1.0e-55 222.2 373 38.3
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 6.7e-52 209.5 609 28.6
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 6.7e-44 183.0 389 33.4
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 2.8e-42 177.6 314 39.2
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.2e-38 164.1 192 48.4
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 9.1e-33 146.0 369 33.6
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 8.8e-28 129.4 129 54.3
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 4.4e-27 127.1 233 34.3
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 9.4e-22 109.4 136 47.1
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 4.8e-18 97.1 154 38.3
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 1.1e-17 95.9 95 51.6
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 3.3e-14 84.3 477 24.9
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 3.6e-13 80.9 302 26.8
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.0e-12 79.3 50 72.0
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.0e-12 79.3 228 27.6
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 8.9e-12 76.3 285 26.0
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.6e-11 74.7 139 32.4
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.4e-11 73.9 60 58.3
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.4e-11 73.9 60 58.3
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 8.3e-10 69.7 290 27.2
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.6e-07 60.1 57 49.1
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 8.6e-07 59.7 51 51.0
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 5.6e-06 57.0 115 28.7


User provided reference genes

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