Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 5.5e-60 234.2 125 100.0
Eucgr.I00949 Eucalyptus grandis HOM05D022674 ORTHO05D009966 9.8e-33 143.7 125 64.0
Eucgr.F04318 Eucalyptus grandis HOM05D022674 ORTHO05D009966 4.5e-30 134.8 125 64.8
Eucgr.I00948 Eucalyptus grandis HOM05D022674 ORTHO05D009966 1.9e-28 129.4 125 63.2
Eucgr.F04319 Eucalyptus grandis HOM05D022674 ORTHO05D009966 6.1e-27 124.4 125 61.6
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 2.1e-14 82.8 125 40.8
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 5.6e-12 74.7 125 42.4
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 7.3e-12 74.3 128 45.3
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 1.6e-11 73.2 125 40.8
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 1.4e-10 70.1 126 39.7
MELO3C007553.2 Cucumis melo HOM05D022436 ORTHO05D009966 3.1e-10 68.9 128 39.1
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 4.0e-10 68.6 129 40.3
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 6.8e-10 67.8 125 41.6
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 1.2e-09 67.0 127 38.6
CsaV3_6G043170 Cucumis sativus L. HOM05D022436 ORTHO05D009966 1.2e-09 67.0 128 39.1
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 1.2e-09 67.0 124 38.7
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 3.4e-09 65.5 125 36.8
Sed0015269 Sechium edule HOM05D022436 ORTHO05D009966 3.4e-09 65.5 65 53.8
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 9.9e-09 63.9 126 38.1
Gohir.A12G070300 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.7e-08 63.2 125 37.6
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 1.7e-08 63.2 126 33.3
ClCG01G016740 Citrullus lanatus HOM05D022436 ORTHO05D009966 2.2e-08 62.8 126 38.1
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 2.9e-08 62.4 130 34.6
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 2.9e-08 62.4 134 34.3
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.7e-08 62.0 127 35.4
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 4.9e-08 61.6 134 34.3
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.4e-08 61.2 73 50.7
Gohir.D12G088501 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.4e-08 61.2 125 36.8
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 8.3e-08 60.8 71 49.3
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 1.1e-07 60.5 127 39.4
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.9e-07 59.7 71 49.3
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.9e-07 59.7 71 49.3
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.4e-07 59.3 59 52.5
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 3.2e-07 58.9 134 34.3
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 4.1e-07 58.5 129 34.1
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 5.4e-07 58.2 126 38.1
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 5.4e-07 58.2 125 32.8
Gorai.008G074700 Gossypium raimondii HOM05D013202 ORTHO05D009966 7.1e-07 57.8 125 37.6
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.2e-06 57.0 62 54.8
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.2e-06 57.0 62 54.8
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 1.2e-06 57.0 125 34.4
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 1.6e-06 56.6 125 36.8
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 1.6e-06 56.6 58 56.9
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 1.6e-06 56.6 58 56.9
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 4.6e-06 55.1 126 34.1


User provided reference genes

Program Settings