Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00935 Eucalyptus grandis HOM05D000135 ORTHO05D000203 4.9e-49 198.4 183 100.0
QL06p041758 Quercus lobata HOM05D000135 ORTHO05D000203 5.9e-10 68.6 84 46.4
Gohir.D11G198300 Gossypium hirsutum HOM05D000135 ORTHO05D000203 1.4e-08 63.9 75 46.7
Gorai.007G212400 Gossypium raimondii HOM05D000135 ORTHO05D000203 1.4e-08 63.9 75 46.7
PGR142G2931 Punica granatum HOM05D000135 ORTHO05D000203 1.4e-08 63.9 92 41.3
Atru.chr5.2711 Acer truncatum HOM05D000135 ORTHO05D000203 5.5e-08 62.0 86 44.2
Gohir.A11G191800 Gossypium hirsutum HOM05D000135 ORTHO05D000203 5.5e-08 62.0 75 44.0
Aqoxy5G01242 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 7.2e-08 61.6 88 46.6
Ca_18679_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 7.2e-08 61.6 80 37.5
COL.COLO4_11402 Corchorus olitorius HOM05D000135 ORTHO05D000203 9.4e-08 61.2 68 41.2
Thecc.01G054700 Theobroma cacao HOM05D000135 ORTHO05D000203 9.4e-08 61.2 63 46.0
Cfa004010 Carpinus fangiana HOM05D000135 ORTHO05D000203 1.2e-07 60.8 82 45.1
Ciclev10029994m.g Citrus clementina HOM05D000135 ORTHO05D000203 1.2e-07 60.8 81 40.7
PGR042G1319 Punica granatum HOM05D000135 ORTHO05D000203 1.6e-07 60.5 77 45.5
PGR142G3781 Punica granatum HOM05D000135 ORTHO05D000203 1.6e-07 60.5 92 40.2
VMungo0251G3651 Vigna mungo HOM05D000135 ORTHO05D000203 1.6e-07 60.5 77 41.6
Phvul.003G292700 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 2.1e-07 60.1 80 40.0
Migut.B00343 Erythranthe guttata HOM05D000135 ORTHO05D000203 2.7e-07 59.7 72 43.1
Haze_15414 Corylus avellana HOM05D000135 ORTHO05D000203 3.6e-07 59.3 82 42.7
Lj5P209T45 Lonicera japonica HOM05D000135 ORTHO05D000203 3.6e-07 59.3 72 41.7
Aqoxy5G01243 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 4.6e-07 58.9 84 44.0
BcaC04g23042 Brassica carinata HOM05D000135 ORTHO05D000203 6.1e-07 58.5 74 41.9
C09p12790 Brassica napus HOM05D000135 ORTHO05D000203 6.1e-07 58.5 74 41.9
Dinv39860 Davidia involucrata HOM05D000135 ORTHO05D000203 6.1e-07 58.5 74 41.9
Duzib147G1692 Durio zibethinus HOM05D000135 ORTHO05D000203 6.1e-07 58.5 56 46.4
Hma1.2p1_0370F.1_g137840 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 6.1e-07 58.5 71 43.7
SGA_v2.0_scaffold90G27662 Striga asiatica HOM05D000135 ORTHO05D000203 6.1e-07 58.5 79 44.3
ECA238G2850 Erigeron canadensis HOM05D000135 ORTHO05D000203 7.9e-07 58.2 84 42.9
Glyma.07G212000 Glycine max HOM05D000135 ORTHO05D000203 7.9e-07 58.2 77 40.3
Peaxi162Scf00152g00004 Petunia axillaris HOM05D000135 ORTHO05D000203 7.9e-07 58.2 71 42.3
Actinidia36498 Actinidia chinensis HOM05D000135 ORTHO05D000203 1.0e-06 57.8 84 35.7
MSTRG.20153 Avicennia marina HOM05D000135 ORTHO05D000203 1.0e-06 57.8 78 47.4
Lsat_1_v5_gn_5_112780 Lactuca sativa HOM05D000135 ORTHO05D000203 1.0e-06 57.8 77 40.3
Lj4g0025559 Lotus japonicus HOM05D000135 ORTHO05D000203 1.0e-06 57.8 76 42.1
arahy.Tifrunner.gnm1.ann1.0RG3QL Arachis hypogaea HOM05D000135 ORTHO05D000203 1.4e-06 57.4 75 38.7
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.4e-06 57.4 75 38.7
HanXRQChr14g0442861 Helianthus annuus HOM05D000135 ORTHO05D000203 1.4e-06 57.4 72 41.7
SalBow5G1733 Salvia bowleyana HOM05D000135 ORTHO05D000203 1.4e-06 57.4 81 40.7
SalBow5G5503 Salvia bowleyana HOM05D000135 ORTHO05D000203 1.4e-06 57.4 81 40.7
Cc02_g18730 Coffea canephora HOM05D000135 ORTHO05D000203 1.8e-06 57.0 75 46.7
HanXRQChr16g0501291 Helianthus annuus HOM05D000135 ORTHO05D000203 1.8e-06 57.0 77 40.3
Duzib187G0789 Durio zibethinus HOM05D000135 ORTHO05D000203 2.3e-06 56.6 73 42.5
Glyma.02G133000 Glycine max HOM05D000135 ORTHO05D000203 2.3e-06 56.6 79 41.8
Gohir.D13G038700 Gossypium hirsutum HOM05D000135 ORTHO05D000203 2.3e-06 56.6 72 41.7
BcaB07g31784 Brassica carinata HOM05D000135 ORTHO05D000203 3.0e-06 56.2 74 40.5
A09p10820 Brassica napus HOM05D000135 ORTHO05D000203 3.0e-06 56.2 74 40.5
BolC9t54168H Brassica oleracea HOM05D000135 ORTHO05D000203 3.0e-06 56.2 74 40.5
BraA09t36724Z Brassica rapa HOM05D000135 ORTHO05D000203 3.0e-06 56.2 74 40.5
Lsat_1_v5_gn_2_84220 Lactuca sativa HOM05D000135 ORTHO05D000203 3.0e-06 56.2 48 52.1
PSO210G1763 Papaver somniferum HOM05D000135 ORTHO05D000203 3.0e-06 56.2 84 42.9
THA.LOC104807357 Tarenaya hassleriana HOM05D000135 ORTHO05D000203 3.0e-06 56.2 71 39.4
Ah.11g040630 Amaranthus hybridus HOM05D000135 ORTHO05D000203 3.9e-06 55.8 78 42.3
Carub.0003s2954 Capsella rubella HOM05D000135 ORTHO05D000203 5.1e-06 55.5 74 39.2
CARHR106030 Cardamine hirsuta HOM05D000135 ORTHO05D000203 5.1e-06 55.5 74 40.5
CiPaw.01G018900 Carya illinoinensis HOM05D000135 ORTHO05D000203 5.1e-06 55.5 72 44.4
Ca_24776_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 5.1e-06 55.5 57 47.4
PSO170G0143 Papaver somniferum HOM05D000135 ORTHO05D000203 5.1e-06 55.5 84 41.7
Potri.007G042900 Populus trichocarpa HOM05D000135 ORTHO05D000203 5.1e-06 55.5 47 48.9
Sabra07G0038000 Salix brachista HOM05D000135 ORTHO05D000203 5.1e-06 55.5 47 48.9
Sc18g0004060 Simmondsia chinensis HOM05D000135 ORTHO05D000203 5.1e-06 55.5 71 42.3
Cfa004515 Carpinus fangiana HOM05D000135 ORTHO05D000203 6.7e-06 55.1 72 38.9
Thhalv10022869m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 6.7e-06 55.1 74 40.5
Gohir.D03G021400 Gossypium hirsutum HOM05D000135 ORTHO05D000203 6.7e-06 55.1 77 36.4
Gorai.003G023100 Gossypium raimondii HOM05D000135 ORTHO05D000203 6.7e-06 55.1 77 36.4
Lalb_Chr16g0384691 Lupinus albus HOM05D000135 ORTHO05D000203 6.7e-06 55.1 77 39.0
Solyc01g108190.3 Solanum lycopersicum HOM05D000135 ORTHO05D000203 6.7e-06 55.1 71 38.0
TWI79G0422 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 6.7e-06 55.1 71 42.3
Manes.10G056100 Manihot esculenta HOM05D000135 ORTHO05D000203 8.8e-06 54.7 70 38.6
Nitab4.5_0001824g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000203 8.8e-06 54.7 71 42.3
Nitab4.5_0006001g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 8.8e-06 54.7 68 45.6
Oeu025574.1 Olea europaea HOM05D000135 ORTHO05D000203 8.8e-06 54.7 72 41.7
Sp3g28920 Schrenkiella parvula HOM05D000135 ORTHO05D000203 8.8e-06 54.7 74 39.2
TAR381G0503 Trochodendron aralioides HOM05D000135 ORTHO05D000203 8.8e-06 54.7 81 39.5


User provided reference genes

Program Settings