Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00889 Eucalyptus grandis HOM05D000017 ORTHO05D000013 3.3e-79 298.1 134 100.0
Eucgr.B01037 Eucalyptus grandis HOM05D000017 ORTHO05D000013 5.4e-21 104.8 62 67.7
Eucgr.H04539 Eucalyptus grandis HOM05D000017 ORTHO05D000013 2.1e-20 102.8 70 67.1
Eucgr.J03175 Eucalyptus grandis HOM05D000017 ORTHO05D000013 1.1e-18 97.1 62 62.9
PGR031G2268 Punica granatum HOM05D000017 ORTHO05D000013 3.9e-11 72.0 105 36.2
Nitab4.5_0000433g0170 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.9e-10 69.7 129 29.5
ECA236G5085 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.3e-10 67.8 68 33.8
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.6e-10 67.4 59 39.0
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.6e-10 67.4 60 40.0
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.6e-10 67.4 59 39.0
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.6e-10 67.4 59 39.0
ECA247G1560 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-09 67.0 67 37.3
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-09 67.0 59 39.0
ECA246G3136 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.6e-09 66.6 87 33.3
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-09 66.6 59 39.0
ECA240G3781 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.1e-09 66.2 76 31.6
FvH4_6g31092 Fragaria vesca HOM05D000017 ORTHO05D000013 2.1e-09 66.2 69 37.7
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-09 66.2 60 36.7
Ca_04121_v3 Cicer arietinum L. HOM05D008026 ORTHO05D011894 2.8e-09 65.9 105 32.4
ECA238G2823 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.8e-09 65.9 67 32.8
ECA238G0389 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.7e-09 65.1 68 33.8
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.7e-09 65.1 61 37.7
ECA234G4579 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.2e-09 64.7 66 33.3
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 6.2e-09 64.7 60 38.3
Hma1.2p1_0439F.1_g153240 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-08 63.2 152 25.0
ECA234G0427 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.4e-08 62.8 68 30.9
FvH4_1g02991 Fragaria vesca HOM05D000017 ORTHO05D000013 2.4e-08 62.8 60 38.3
Rhsim10G0192300 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.4e-08 62.8 97 35.1
ECA240G0961 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.1e-08 62.4 87 29.9
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-08 62.4 59 37.3
Rhsim08G0011600 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-08 62.4 61 39.3
Hma1.2p1_0587F.1_g183910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.2e-08 61.6 74 33.8
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-08 61.2 61 36.1
Hma1.2p1_2307F.1_g319440 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-08 61.2 61 37.7
FvH4_6g39831 Fragaria vesca HOM05D000017 ORTHO05D000013 8.9e-08 60.8 60 35.0
RcHm_v2.0_Chr5g0080361 Rosa chinensis HOM05D000017 ORTHO05D000013 8.9e-08 60.8 71 33.8
ECA248G3195 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-07 60.5 69 30.4
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-07 60.5 75 32.0
TWI09G1452 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-07 60.5 70 45.7
HPP92_017780 Vanilla planifolia HOM05D000017 ORTHO05D000013 1.5e-07 60.1 61 34.4
COL.COLO4_28739 Corchorus olitorius HOM05D000017 ORTHO05D000013 2.0e-07 59.7 74 32.4
ECA248G0537 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.0e-07 59.7 68 32.4
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-07 59.7 61 36.1
ECA232G4288 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.6e-07 59.3 67 32.8
ECA234G1361 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.6e-07 59.3 66 33.3
ECA236G1612 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.6e-07 59.3 66 34.8
ECA248G3441 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.6e-07 59.3 66 36.4
Rhsim09G0049900 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.6e-07 59.3 60 31.7
ECA247G0117 Erigeron canadensis HOM05D000420 ORTHO05D000110 3.4e-07 58.9 62 33.9
ECA247G2348 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.4e-07 58.9 69 29.0
TWI59G1326 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.4e-07 58.9 57 49.1
ECA238G2722 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.4e-07 58.5 69 29.0
TWI14G1428 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.4e-07 58.5 50 56.0
TWI53G0734 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.4e-07 58.5 50 56.0
ECA238G0864 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.8e-07 58.2 68 30.9
ECA238G1317 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.8e-07 58.2 67 29.9
ECA246G4247 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.8e-07 58.2 67 29.9
ECA247G4043 Erigeron canadensis HOM05D000017 ORTHO05D004107 5.8e-07 58.2 73 34.2
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-07 58.2 53 35.8
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-07 58.2 60 35.0
ECA248G3125 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.6e-07 57.8 68 33.8
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 7.6e-07 57.8 59 33.9
RcHm_v2.0_Chr5g0049571 Rosa chinensis HOM05D000017 ORTHO05D000013 7.6e-07 57.8 60 33.3
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 7.6e-07 57.8 60 31.7
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 7.6e-07 57.8 61 32.8
ECA233G5237 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.9e-07 57.4 54 42.6
ECA247G2333 Erigeron canadensis HOM05D000017 ORTHO05D004107 9.9e-07 57.4 118 24.6
Hma1.2p1_0361F.1_g135970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.9e-07 57.4 72 34.7
PGR004G1098 Punica granatum HOM05D000017 ORTHO05D000013 9.9e-07 57.4 70 34.3
ECA233G0992 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.3e-06 57.0 66 34.8
ECA234G0376 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.3e-06 57.0 65 30.8
TWI09G1270 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-06 57.0 57 49.1
TWI53G1859 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-06 57.0 57 49.1
ECA232G0894 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.7e-06 56.6 68 32.4
Rhsim05G0107100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-06 56.6 59 33.9
Rhsim05G0107300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-06 56.6 59 33.9
TWI79G0426 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-06 56.6 71 39.4
Os01g0595300 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 2.2e-06 56.2 73 38.4
PGR004G0303 Punica granatum HOM05D000017 ORTHO05D000013 2.2e-06 56.2 69 27.5
SGA_v2.0_scaffold199G41208 Striga asiatica HOM05D000017 ORTHO05D000013 2.2e-06 56.2 49 53.1
TWI09G1423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-06 56.2 71 39.4
EL10Ac5g13044 Beta vulgaris HOM05D000017 ORTHO05D000013 2.9e-06 55.8 44 45.5
EL10Ac7g17478 Beta vulgaris HOM05D000017 ORTHO05D000013 2.9e-06 55.8 44 45.5
FvH4_2g09291 Fragaria vesca HOM05D000017 ORTHO05D009451 2.9e-06 55.8 81 37.0
PGR031G0508 Punica granatum HOM05D000017 ORTHO05D000013 2.9e-06 55.8 52 36.5
TWI31G1298 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.9e-06 55.8 71 39.4
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 3.8e-06 55.5 59 35.6
Prupe.6G181000 Prunus persica HOM05D000017 ORTHO05D000013 3.8e-06 55.5 49 49.0
SGA_v2.0_scaffold39G15191 Striga asiatica HOM05D000017 ORTHO05D000013 3.8e-06 55.5 59 35.6
TWI74G0867 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.8e-06 55.5 71 40.8
ECA233G2354 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.9e-06 55.1 66 33.3
ECA233G3872 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.9e-06 55.1 75 29.3
ECA247G2865 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.9e-06 55.1 73 35.6
Nitab4.5_0005970g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.9e-06 55.1 69 34.8
Os12g0597300 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 32.8
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.9e-06 55.1 61 32.8
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.9e-06 55.1 124 27.4
Ah.12g064410 Amaranthus hybridus HOM05D000017 ORTHO05D000013 6.4e-06 54.7 53 39.6
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 54.7 66 34.8
ECA234G1768 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.4e-06 54.7 68 29.4
FvH4_2g11355 Fragaria vesca HOM05D000017 ORTHO05D000013 6.4e-06 54.7 61 36.1
FvH4_6g29311 Fragaria vesca HOM05D000017 ORTHO05D000013 6.4e-06 54.7 61 36.1
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-06 54.7 48 39.6
Hma1.2p1_0085F.1_g044120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-06 54.7 53 35.8
Hma1.2p1_0085F.1_g044131 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-06 54.7 53 35.8
Hma1.2p1_0104F.1_g050035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-06 54.7 69 33.3
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-06 54.7 53 35.8
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-06 54.7 70 28.6
Prupe.7G029200 Prunus persica HOM05D000017 ORTHO05D000013 6.4e-06 54.7 70 32.9
PGR044G1328 Punica granatum HOM05D000017 ORTHO05D000013 6.4e-06 54.7 69 29.0
ECA233G6257 Erigeron canadensis HOM05D000214 ORTHO05D000013 8.4e-06 54.3 72 29.2
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-06 54.3 48 37.5
Lj3P133T14 Lonicera japonica HOM05D000017 ORTHO05D000013 8.4e-06 54.3 45 37.8


User provided reference genes

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