Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00817 Eucalyptus grandis HOM05D001855 ORTHO05D193041 1.6e-40 169.1 90 100.0
Eucgr.I00763 Eucalyptus grandis HOM05D001855 ORTHO05D002034 2.7e-16 88.6 74 67.6
Eucgr.I00789 Eucalyptus grandis HOM05D001855 ORTHO05D002034 2.7e-16 88.6 74 67.6
PGR102G2575 Punica granatum HOM05D001855 ORTHO05D002034 1.2e-11 73.2 74 55.4
TWI73G0726 Tripterygium wilfordii HOM05D001855 ORTHO05D002034 1.5e-11 72.8 68 61.8
Cpa.g.sc6.101 Carica papaya HOM05D001855 ORTHO05D002034 4.4e-11 71.2 76 55.3
Haze_15353 Corylus avellana HOM05D001855 ORTHO05D002034 7.6e-11 70.5 74 54.1
Cfa004059 Carpinus fangiana HOM05D001855 ORTHO05D002034 1.3e-10 69.7 74 52.7
Ciclev10026070m.g Citrus clementina HOM05D001855 ORTHO05D002034 1.3e-10 69.7 76 55.3
Duzib147G0725 Durio zibethinus HOM05D001855 ORTHO05D002034 2.2e-10 68.9 76 51.3
CiPaw.01G013200 Carya illinoinensis HOM05D001855 ORTHO05D002034 1.9e-09 65.9 74 48.6
Duzib187G1106 Durio zibethinus HOM05D001855 ORTHO05D002034 2.4e-09 65.5 77 51.9
Thecc.01G063100 Theobroma cacao HOM05D001855 ORTHO05D002034 2.4e-09 65.5 76 50.0
Potri.005G142200 Populus trichocarpa HOM05D001855 ORTHO05D002034 3.2e-09 65.1 77 49.4
Sabra05G0113400 Salix brachista HOM05D001855 ORTHO05D002034 3.2e-09 65.1 77 49.4
Dinv26863 Davidia involucrata HOM05D001855 ORTHO05D002034 5.4e-09 64.3 57 59.6
Duzib264G0265 Durio zibethinus HOM05D001855 ORTHO05D002034 9.3e-09 63.5 76 50.0
Sed0011523 Sechium edule HOM05D001855 ORTHO05D002034 9.3e-09 63.5 78 52.6
MELO3C007584.2 Cucumis melo HOM05D001855 ORTHO05D002034 1.2e-08 63.2 75 53.3
Gohir.A02G155100 Gossypium hirsutum HOM05D001855 ORTHO05D002034 2.7e-08 62.0 74 48.6
Gohir.D03G025600 Gossypium hirsutum HOM05D001855 ORTHO05D002034 2.7e-08 62.0 74 48.6
Gorai.003G027200 Gossypium raimondii HOM05D001855 ORTHO05D002034 2.7e-08 62.0 74 48.6
Atru.chr3.254 Acer truncatum HOM05D001855 ORTHO05D002034 3.5e-08 61.6 61 60.7
ClCG01G017070 Citrullus lanatus HOM05D001855 ORTHO05D002034 6.0e-08 60.8 75 52.0
CSS0027109 Camellia sinensis var. sinensis HOM05D001855 ORTHO05D002034 7.8e-08 60.5 57 57.9
CiPaw.02G006200 Carya illinoinensis HOM05D001855 ORTHO05D002034 7.8e-08 60.5 74 45.9
Dinv30031 Davidia involucrata HOM05D001855 ORTHO05D002034 1.3e-07 59.7 78 43.6
Potri.007G048700 Populus trichocarpa HOM05D001855 ORTHO05D002034 1.3e-07 59.7 77 46.8
Actinidia12021 Actinidia chinensis HOM05D001855 ORTHO05D002034 1.7e-07 59.3 76 44.7
Actinidia36465 Actinidia chinensis HOM05D001855 ORTHO05D002034 1.7e-07 59.3 76 44.7
Lalb_Chr05g0213441 Lupinus albus HOM05D001855 ORTHO05D002034 2.3e-07 58.9 76 43.4
Prupe.6G229300 Prunus persica HOM05D001855 ORTHO05D002034 2.3e-07 58.9 60 55.0
CsaV3_6G043540 Cucumis sativus L. HOM05D001855 ORTHO05D002034 3.0e-07 58.5 75 50.7
COL.COLO4_11480 Corchorus olitorius HOM05D001855 ORTHO05D002034 5.1e-07 57.8 77 46.8
Hma1.2p1_0239F.1_g100070 Hydrangea macrophylla HOM05D001855 ORTHO05D002034 6.6e-07 57.4 76 40.8
MD15G1288400 Malus domestica HOM05D001855 ORTHO05D002034 8.7e-07 57.0 76 44.7
vmacro17975 Vaccinium macrocarpon HOM05D001855 ORTHO05D002034 1.1e-06 56.6 76 42.1
VMungo1215G0474 Vigna mungo HOM05D001855 ORTHO05D002034 1.1e-06 56.6 76 42.1
PSO541G3569 Papaver somniferum HOM05D001855 ORTHO05D002034 1.5e-06 56.2 76 40.8
TAR628G1497 Trochodendron aralioides HOM05D001855 ORTHO05D002034 2.5e-06 55.5 74 41.9
Rhsim08G0097700 Rhododendron simsii HOM05D001855 ORTHO05D002034 3.3e-06 55.1 76 40.8
CANSAT25G1046 Cannabis sativa HOM05D001855 ORTHO05D002034 4.3e-06 54.7 78 46.2
CANSAT25G1347 Cannabis sativa HOM05D001855 ORTHO05D002034 4.3e-06 54.7 78 46.2
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 4.3e-06 54.7 77 41.6
PSO675G6853 Papaver somniferum HOM05D001855 ORTHO05D002034 4.3e-06 54.7 76 39.5
TAR376G0852 Trochodendron aralioides HOM05D001855 ORTHO05D002493 4.3e-06 54.7 76 42.1
ClCG02G008060 Citrullus lanatus HOM05D001855 ORTHO05D002034 7.3e-06 53.9 78 44.9
Glyma.01G190000 Glycine max HOM05D001855 ORTHO05D002034 7.3e-06 53.9 76 40.8
Lj2g0017922 Lotus japonicus HOM05D001855 ORTHO05D002034 7.3e-06 53.9 76 40.8
Manes.13G118600 Manihot esculenta HOM05D001855 ORTHO05D002034 9.6e-06 53.5 75 46.7


User provided reference genes

Program Settings