Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 6.5e-81 304.3 187 100.0
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 1.4e-19 100.5 183 50.3
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 5.4e-19 98.6 182 42.3
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 1.6e-18 97.1 192 43.8
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 2.7e-18 96.3 179 43.6
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 3.5e-18 95.9 182 48.9
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 3.5e-18 95.9 178 41.0
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 3.9e-17 92.4 186 48.9
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 8.6e-17 91.3 189 47.6
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 2.5e-16 89.7 190 42.6
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 5.6e-16 88.6 179 42.5
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 2.1e-15 86.7 157 40.8
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 2.8e-15 86.3 186 48.4
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 2.8e-15 86.3 186 45.7
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 4.7e-15 85.5 177 40.1
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 8.9e-14 81.3 187 36.9
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 4.4e-13 79.0 192 38.5
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 5.8e-13 78.6 176 38.6
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 7.6e-13 78.2 199 42.7
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 1.3e-12 77.4 176 49.4
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 6.4e-12 75.1 124 47.6
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 8.4e-12 74.7 178 37.6
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 1.9e-11 73.6 184 37.5
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 1.9e-11 73.6 184 37.5
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 1.9e-11 73.6 188 42.6
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 1.9e-11 73.6 177 42.4
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 2.4e-11 73.2 177 33.9
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 3.2e-11 72.8 150 40.0
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 3.2e-11 72.8 185 36.2
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 7.1e-11 71.6 128 43.0
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 9.2e-11 71.2 185 35.1
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 1.6e-10 70.5 130 44.6
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 2.1e-10 70.1 171 40.9
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 2.7e-10 69.7 183 42.6
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 4.6e-10 68.9 202 34.7
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 6.0e-10 68.6 178 39.3
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 1.0e-09 67.8 177 31.1
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 3.0e-09 66.2 182 37.4
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 3.9e-09 65.9 190 35.8
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 5.1e-09 65.5 180 41.7
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 1.9e-08 63.5 195 37.9
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 2.5e-08 63.2 185 34.6
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 3.3e-08 62.8 110 43.6
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 3.3e-08 62.8 182 47.3
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 4.3e-08 62.4 101 42.6
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 4.3e-08 62.4 182 33.5
Haze_15266 Corylus avellana HOM05D064528 ORTHO05D043735 5.6e-08 62.0 94 50.0
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 1.2e-07 60.8 177 33.3
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 1.2e-07 60.8 143 35.7
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 1.6e-07 60.5 179 36.9
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 1.6e-07 60.5 179 32.4
FAN23G3114 Fragaria x ananassa HOM05D007502 ORTHO05D010230 6.2e-07 58.5 115 44.3
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 1.4e-06 57.4 136 37.5
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 2.4e-06 56.6 196 34.2
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 2.4e-06 56.6 116 36.2
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 4.0e-06 55.8 151 35.1
Nitab4.5_0003129g0050 Nicotiana tabacum HOM05D007502 ORTHO05D010230 4.0e-06 55.8 94 45.7
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 4.0e-06 55.8 182 36.8
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 5.2e-06 55.5 112 35.7
Cfa004146 Carpinus fangiana HOM05D064528 ORTHO05D043735 8.9e-06 54.7 107 44.9


User provided reference genes

Program Settings