Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 1.2e-92 343.2 177 100.0
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 3.7e-62 241.9 178 69.7
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 1.2e-57 226.9 174 67.8
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 3.6e-57 225.3 173 64.7
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 6.2e-57 224.6 172 68.0
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 8.1e-57 224.2 174 65.5
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 8.1e-57 224.2 174 66.7
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 8.9e-56 220.7 174 66.1
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 8.9e-56 220.7 168 67.3
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 4.4e-55 218.4 180 63.9
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 3.7e-54 215.3 171 63.2
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 4.9e-54 214.9 175 64.0
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 8.3e-54 214.2 172 65.1
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.1e-53 213.8 174 64.4
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 1.1e-53 213.8 153 70.6
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 1.1e-53 213.8 153 70.6
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 2.4e-53 212.6 177 62.1
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 2.4e-53 212.6 177 62.1
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 5.4e-53 211.5 173 64.7
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 7.1e-53 211.1 172 62.2
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 9.2e-53 210.7 174 60.9
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 9.2e-53 210.7 174 60.9
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.6e-52 209.9 171 64.3
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 2.1e-52 209.5 174 61.5
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 2.1e-52 209.5 153 70.6
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 2.1e-52 209.5 171 63.2
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.5e-52 208.8 172 61.0
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 7.8e-52 207.6 175 60.6
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 1.7e-51 206.5 176 59.1
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 1.7e-51 206.5 174 60.3
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 1.7e-51 206.5 174 60.3
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 1.7e-51 206.5 174 65.5
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 2.3e-51 206.1 175 61.7
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 2.3e-51 206.1 175 61.7
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 2.3e-51 206.1 174 58.0
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.9e-51 205.3 172 59.9
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 5.1e-51 204.9 174 59.8
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 6.6e-51 204.5 172 61.6
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 1.5e-50 203.4 174 59.8
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 1.5e-50 203.4 177 59.3
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 4.3e-50 201.8 200 55.5
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 5.6e-50 201.4 172 62.8
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 7.3e-50 201.1 174 58.6
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 2.1e-49 199.5 166 60.8
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 1.1e-48 197.2 175 60.0
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 1.4e-48 196.8 179 61.5
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 4.0e-48 195.3 175 59.4
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 5.2e-48 194.9 175 59.4
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 8.9e-48 194.1 181 59.1
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.0e-47 193.0 173 59.0
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 2.6e-47 192.6 199 52.8
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 2.6e-47 192.6 171 59.1
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 3.4e-47 192.2 175 57.7
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 3.4e-47 192.2 167 58.1
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.4e-47 192.2 175 58.9
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 1.3e-46 190.3 155 65.2
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.8e-46 188.7 175 57.7
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 6.4e-46 188.0 151 62.3
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 8.4e-46 187.6 166 58.4
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.1e-45 187.2 174 56.9
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.1e-45 187.2 174 54.6
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 1.9e-45 186.4 171 57.3
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 2.4e-45 186.0 171 56.7
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 3.2e-45 185.7 173 57.8
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.7e-44 182.6 176 54.0
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 7.8e-44 181.0 163 58.9
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 3.0e-43 179.1 156 59.0
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 5.1e-43 178.3 163 57.1
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 5.1e-43 178.3 178 56.2
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 6.6e-43 177.9 154 59.1
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 6.6e-43 177.9 168 58.3
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.5e-42 176.8 169 54.4
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.9e-42 176.4 166 54.2
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 2.5e-42 176.0 173 56.1
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 3.3e-42 175.6 171 53.2
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 3.3e-42 175.6 166 53.6
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 4.8e-41 171.8 127 69.3
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 6.2e-41 171.4 133 65.4
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 3.1e-40 169.1 157 59.2
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 4.0e-40 168.7 164 56.1
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 6.9e-40 167.9 167 53.9
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 2.0e-39 166.4 171 50.9
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 2.0e-39 166.4 169 53.3
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 3.4e-39 165.6 169 53.3
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 4.4e-39 165.2 167 53.9
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 5.8e-39 164.9 153 54.9
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 9.9e-39 164.1 167 52.7
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 1.3e-38 163.7 163 52.8
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.2e-38 162.9 133 63.2
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 1.4e-37 160.2 157 52.9
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 3.2e-37 159.1 174 50.6
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 3.2e-37 159.1 170 52.4
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 3.2e-37 159.1 130 64.6
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 5.4e-37 158.3 174 48.9
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 7.1e-37 157.9 174 48.9
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 9.3e-37 157.5 165 49.1
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 2.7e-36 156.0 165 50.9
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 3.5e-36 155.6 135 60.7
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 3.5e-36 155.6 153 52.9
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 1.7e-35 153.3 145 56.6
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 3.0e-35 152.5 174 48.3
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 3.0e-35 152.5 165 49.1
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 3.9e-35 152.1 142 57.0
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 3.9e-35 152.1 166 52.4
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 5.1e-35 151.8 165 50.9
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 5.1e-35 151.8 165 50.9
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 6.6e-35 151.4 165 49.1
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 1.5e-34 150.2 135 57.8
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 1.5e-34 150.2 147 55.1
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 5.6e-34 148.3 157 53.5
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 9.6e-34 147.5 129 57.4
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 9.6e-34 147.5 165 49.1
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 1.6e-33 146.7 167 47.9
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 4.8e-33 145.2 216 42.6
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 6.2e-33 144.8 207 44.4
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 4.0e-32 142.1 171 46.2
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 6.9e-32 141.4 215 42.8
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.2e-31 140.6 146 51.4
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 1.2e-31 140.6 176 44.9
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 5.8e-31 138.3 274 35.8
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 2.2e-30 136.3 180 45.6
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 1.1e-29 134.0 89 73.0
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.4e-29 132.9 154 48.1
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 7.1e-29 131.3 145 50.3
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 6.7e-27 124.8 154 48.1
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 8.7e-27 124.4 110 60.0
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 7.4e-26 121.3 163 44.2
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.1e-24 117.5 137 49.6
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 4.0e-24 115.5 172 41.3
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 6.9e-24 114.8 135 45.9
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 5.8e-23 111.7 112 55.4
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 3.2e-21 105.9 173 39.3
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 3.2e-21 105.9 173 38.2
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.6e-20 103.6 91 57.1
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 4.6e-20 102.1 162 37.7
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 1.0e-19 100.9 83 66.3
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 1.3e-19 100.5 84 61.9
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 1.1e-18 97.4 82 62.2
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.1e-18 97.4 81 51.9
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.7e-17 92.4 84 64.3
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 4.8e-17 92.0 109 50.5
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 1.5e-15 87.0 90 56.7
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.5e-15 87.0 85 56.5
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 4.5e-15 85.5 138 37.7
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 5.8e-15 85.1 85 55.3
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 3.2e-13 79.3 168 34.5
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 5.5e-13 78.6 145 38.6
Cre09.g387504 Chlamydomonas reinhardtii HOM05D004607 ORTHO05D005836 2.5e-10 69.7 145 29.0
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.7e-09 65.9 49 73.5
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 6.3e-09 65.1 61 54.1
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 1.4e-08 63.9 115 40.9
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 2.4e-08 63.2 80 50.0
CBR_g18647 Chara braunii HOM05D004607 ORTHO05D005836 5.9e-07 58.5 158 31.0


User provided reference genes

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