Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00399 Eucalyptus grandis HOM05D041455 ORTHO05D000088 3.8e-44 181.0 85 100.0
Eucgr.I00465 Eucalyptus grandis HOM05D041455 ORTHO05D000088 4.9e-36 154.1 73 97.3
Eucgr.I00402 Eucalyptus grandis HOM05D041455 ORTHO05D000088 3.2e-35 151.4 75 92.0
Eucgr.I00400 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.6e-31 139.0 84 81.0
Eucgr.I00403 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.7e-18 95.1 76 64.5
Eucgr.I00397 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.7e-16 87.4 86 51.2
Eucgr.B02808 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.1e-11 73.2 82 45.1
CANSAT35G1305 Cannabis sativa HOM05D000395 ORTHO05D000088 4.2e-11 71.2 81 39.5
CANSAT35G1236 Cannabis sativa HOM05D000395 ORTHO05D000088 9.4e-11 70.1 81 38.3
Eucgr.G00888 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.6e-10 69.3 80 41.2
Prupe.7G044800 Prunus persica HOM05D000395 ORTHO05D000088 2.1e-10 68.9 78 46.2
Eucgr.G01639 Eucalyptus grandis HOM05D000395 ORTHO05D000088 6.1e-10 67.4 77 49.4
Eucgr.G00890 Eucalyptus grandis HOM05D000395 ORTHO05D000088 7.9e-10 67.0 80 43.8
QL06p043952 Quercus lobata HOM05D000395 ORTHO05D000088 7.9e-10 67.0 78 42.3
Eucgr.G01240 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.1e-09 64.3 84 34.5
Eucgr.G01245 Eucalyptus grandis HOM05D000395 ORTHO05D000088 6.7e-09 63.9 81 39.5
Prupe.7G143500 Prunus persica HOM05D000395 ORTHO05D000088 6.7e-09 63.9 80 41.2
Duzib264G0510 Durio zibethinus HOM05D000395 ORTHO05D000088 1.1e-08 63.2 79 38.0
Eucgr.I00407 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.1e-08 63.2 77 44.2
Lj2g0024892 Lotus japonicus HOM05D000395 ORTHO05D000088 1.1e-08 63.2 80 41.2
GSVIVG01005087001 Vitis vinifera HOM05D000395 ORTHO05D000088 1.1e-08 63.2 77 37.7
Dinv26761 Davidia involucrata HOM05D000395 ORTHO05D000088 1.9e-08 62.4 78 37.2
Eucgr.D00269 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.9e-08 62.4 78 37.2
FvH4_7g02010 Fragaria vesca HOM05D000395 ORTHO05D000088 1.9e-08 62.4 83 47.0
FAN06G4020 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.9e-08 62.4 83 47.0
Gohir.A08G223600 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.9e-08 62.4 79 38.0
Gorai.004G260200 Gossypium raimondii HOM05D000395 ORTHO05D000088 1.9e-08 62.4 79 38.0
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 2.5e-08 62.0 83 34.9
Eucgr.G00889 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.5e-08 62.0 78 43.6
Eucgr.G01246 Eucalyptus grandis HOM05D000395 ORTHO05D000088 3.3e-08 61.6 91 35.2
Gorai.011G103800 Gossypium raimondii HOM05D000395 ORTHO05D000088 3.3e-08 61.6 82 35.4
Eucgr.G01238 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.7e-08 60.8 87 33.3
QL09p026080 Quercus lobata HOM05D000395 ORTHO05D000088 5.7e-08 60.8 83 41.0
Gohir.A10G093700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.7e-08 60.1 81 35.8
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 9.7e-08 60.1 79 35.4
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 9.7e-08 60.1 79 35.4
Manes.07G115100 Manihot esculenta HOM05D000395 ORTHO05D000088 9.7e-08 60.1 81 40.7
CiPaw.01G027300 Carya illinoinensis HOM05D000395 ORTHO05D000088 1.7e-07 59.3 67 44.8
FvH4_6g38690 Fragaria vesca HOM05D000395 ORTHO05D000088 2.2e-07 58.9 77 37.7
Gohir.1Z049472 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.2e-07 58.9 79 36.7
Eucgr.G01241 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.8e-07 58.5 107 33.6
CSS0034604 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 3.7e-07 58.2 79 41.8
Gohir.D10G094400 Gossypium hirsutum HOM05D000395 ORTHO05D000088 3.7e-07 58.2 81 33.3
QL09p026069 Quercus lobata HOM05D000395 ORTHO05D000088 3.7e-07 58.2 39 66.7
QL09p026131 Quercus lobata HOM05D000395 ORTHO05D000088 3.7e-07 58.2 39 66.7
Manes.13G130900 Manihot esculenta HOM05D000395 ORTHO05D000088 4.8e-07 57.8 78 43.6
CANSAT01G1431 Cannabis sativa HOM05D000395 ORTHO05D000088 6.3e-07 57.4 79 35.4
Manes.10G033150 Manihot esculenta HOM05D000395 ORTHO05D000088 6.3e-07 57.4 83 36.1
Eucgr.D00268 Eucalyptus grandis HOM05D000395 ORTHO05D000088 8.2e-07 57.0 82 34.1
QL09p026061 Quercus lobata HOM05D000395 ORTHO05D000088 8.2e-07 57.0 39 66.7
QL09p026218 Quercus lobata HOM05D000395 ORTHO05D000088 8.2e-07 57.0 83 39.8
arahy.Tifrunner.gnm1.ann1.335W22 Arachis hypogaea HOM05D000395 ORTHO05D000088 1.1e-06 56.6 80 33.8
Dinv27599 Davidia involucrata HOM05D000395 ORTHO05D000088 1.1e-06 56.6 84 39.3
FvH4_6g38700 Fragaria vesca HOM05D000395 ORTHO05D000088 1.1e-06 56.6 78 41.0
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.1e-06 56.6 78 41.0
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 1.1e-06 56.6 84 31.0
Atru.chr5.2786 Acer truncatum HOM05D000395 ORTHO05D000088 1.4e-06 56.2 85 30.6
Lj7A19G27 Lonicera japonica HOM05D000395 ORTHO05D000088 1.4e-06 56.2 80 37.5
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 1.4e-06 56.2 80 37.5
Manes.10G031300 Manihot esculenta HOM05D000395 ORTHO05D000088 1.4e-06 56.2 79 40.5
QL09p026066 Quercus lobata HOM05D000395 ORTHO05D000088 1.4e-06 56.2 79 38.0
Atru.chr5.2805 Acer truncatum HOM05D000395 ORTHO05D000088 1.8e-06 55.8 82 31.7
CANSAT56G1143 Cannabis sativa HOM05D019975 ORTHO05D000088 1.8e-06 55.8 80 35.0
QL02p083510 Quercus lobata HOM05D000395 ORTHO05D000088 1.8e-06 55.8 80 37.5
QL04p022650 Quercus lobata HOM05D000395 ORTHO05D000088 1.8e-06 55.8 79 36.7
arahy.Tifrunner.gnm1.ann1.KVNU80 Arachis hypogaea HOM05D000395 ORTHO05D000088 2.4e-06 55.5 80 33.8
QL05p004460 Quercus lobata HOM05D000395 ORTHO05D000088 2.4e-06 55.5 79 38.0
arahy.Tifrunner.gnm1.ann1.TU4N0L Arachis hypogaea HOM05D000395 ORTHO05D000088 3.1e-06 55.1 81 30.9
Eucgr.B02809 Eucalyptus grandis HOM05D000395 ORTHO05D000088 3.1e-06 55.1 79 41.8
FvH4_1g29250 Fragaria vesca HOM05D000395 ORTHO05D000088 3.1e-06 55.1 83 42.2
FAN19G3192 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-06 55.1 83 42.2
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-06 55.1 74 37.8
PGR004G1423 Punica granatum HOM05D000395 ORTHO05D000088 3.1e-06 55.1 86 38.4
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 4.1e-06 54.7 81 29.6
PGR044G2371 Punica granatum HOM05D000395 ORTHO05D000088 5.3e-06 54.3 83 37.3
QL09p019482 Quercus lobata HOM05D000395 ORTHO05D000088 5.3e-06 54.3 61 45.9
Atru.chr5.2849 Acer truncatum HOM05D000395 ORTHO05D000088 6.9e-06 53.9 77 33.8
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 6.9e-06 53.9 74 36.5
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 6.9e-06 53.9 74 36.5
Cpa.g.sc10.140 Carica papaya HOM05D000395 ORTHO05D000088 9.1e-06 53.5 80 31.2
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 9.1e-06 53.5 82 36.6


User provided reference genes

Program Settings