Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 0.0e+00 1173.7 642 100.0
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 3.2e-188 662.5 647 62.4
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 1.4e-162 577.4 652 55.8
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 2.7e-158 563.1 661 54.2
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 4.5e-158 562.4 654 54.4
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 1.3e-157 560.8 678 52.9
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 3.8e-157 559.3 691 52.8
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 2.5e-156 556.6 688 52.9
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 3.2e-156 556.2 653 53.9
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 4.7e-155 552.4 659 54.0
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 1.8e-154 550.4 685 52.6
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 1.8e-154 550.4 663 53.4
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 5.7e-153 545.4 647 53.6
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 1.8e-151 540.4 688 51.3
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 1.6e-150 537.3 639 54.1
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 2.0e-150 537.0 659 53.6
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 3.8e-149 532.7 655 53.9
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 8.6e-149 531.6 654 52.6
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 4.3e-148 529.3 651 51.9
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 1.5e-145 520.8 652 52.0
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 2.0e-145 520.4 670 52.4
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 2.6e-145 520.0 674 49.9
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 3.4e-145 519.6 647 51.0
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 7.5e-145 518.5 651 52.2
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 7.5e-145 518.5 651 52.2
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 9.8e-145 518.1 661 51.4
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.1e-143 514.6 652 51.5
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 7.0e-143 511.9 666 51.4
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 7.0e-143 511.9 674 51.0
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 2.7e-142 510.0 673 50.8
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 4.6e-142 509.2 728 48.5
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.3e-141 507.7 678 51.0
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 1.7e-141 507.3 485 62.9
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 3.9e-141 506.1 701 48.2
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 1.1e-140 504.6 673 48.7
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 3.3e-140 503.1 657 50.5
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 4.3e-140 502.7 663 48.4
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 5.6e-140 502.3 660 50.6
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 2.1e-139 500.4 673 48.6
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 2.8e-139 500.0 662 49.4
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 4.7e-139 499.2 663 49.2
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 1.8e-138 497.3 678 50.3
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 1.5e-137 494.2 659 49.8
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 2.0e-137 493.8 654 49.7
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 7.5e-137 491.9 659 49.9
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 7.5e-137 491.9 663 48.6
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 4.9e-136 489.2 678 50.3
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 7.0e-135 485.3 655 49.9
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 7.0e-135 485.3 626 51.1
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 1.2e-134 484.6 656 49.4
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 2.7e-134 483.4 666 48.0
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 5.0e-133 479.2 655 47.6
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 8.6e-133 478.4 662 48.5
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 1.1e-132 478.0 714 46.8
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 7.3e-132 475.3 672 48.5
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 4.7e-131 472.6 667 47.1
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 4.7e-131 472.6 654 48.2
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 8.1e-131 471.9 667 47.2
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 1.8e-130 470.7 653 48.2
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 2.3e-130 470.3 394 66.0
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 4.0e-130 469.5 689 47.0
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 4.4e-129 466.1 661 47.7
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 5.8e-129 465.7 337 76.9
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 3.7e-128 463.0 659 47.8
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 1.1e-127 461.5 657 48.4
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 1.4e-127 461.1 673 47.1
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 2.4e-127 460.3 628 49.5
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 1.6e-126 457.6 644 48.0
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.1e-126 457.2 686 47.7
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 7.8e-126 455.3 661 48.7
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 1.0e-125 454.9 659 46.6
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 6.6e-125 452.2 638 47.2
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 1.2e-123 448.0 612 48.5
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 2.8e-123 446.8 658 47.3
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 2.8e-123 446.8 676 45.4
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 2.4e-122 443.7 606 49.7
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 8.9e-122 441.8 726 44.2
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 4.4e-121 439.5 667 47.7
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 5.8e-121 439.1 340 71.8
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 5.8e-121 439.1 670 46.4
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 7.6e-121 438.7 659 47.6
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 3.8e-120 436.4 702 44.6
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 1.7e-117 427.6 666 44.9
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 1.5e-113 414.5 617 45.2
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.5e-113 414.5 669 44.4
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 3.8e-112 409.8 624 47.0
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 6.4e-112 409.1 381 63.0
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 1.4e-111 407.9 656 44.5
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 1.9e-111 407.5 670 44.0
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.1e-110 404.1 587 47.0
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.1e-110 404.1 587 47.0
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 1.0e-109 401.7 656 43.4
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 3.6e-107 393.3 634 44.3
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 6.2e-107 392.5 681 42.7
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 5.3e-106 389.4 577 45.2
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 3.0e-101 373.6 399 56.4
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 6.7e-101 372.5 648 40.6
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 8.7e-101 372.1 367 59.7
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 2.1e-99 367.5 525 48.4
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 2.9e-96 357.1 395 52.9
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 3.5e-94 350.1 655 41.2
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 7.4e-92 342.4 428 50.5
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 5.7e-84 316.2 669 37.8
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 2.6e-65 254.2 446 43.3
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 4.5e-57 226.9 388 39.2
A01p00580 Brassica napus HOM05D004921 ORTHO05D006008 3.8e-56 223.8 287 49.1
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 6.5e-56 223.0 217 59.4
SEGI_00052 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 1.9e-55 221.5 319 48.0
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 3.2e-55 220.7 478 39.1
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 4.1e-50 203.8 565 33.6
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 5.5e-47 193.4 464 36.2
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 9.4e-47 192.6 125 77.6
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 1.2e-46 192.2 549 30.8
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 2.1e-46 191.4 225 54.2
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 3.6e-46 190.7 564 30.9
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 4.4e-44 183.7 349 35.2
BraA01t00066Z Brassica rapa HOM05D004921 ORTHO05D006008 1.1e-42 179.1 193 54.4
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 1.7e-40 171.8 112 77.7
BolC1t00074H Brassica oleracea HOM05D004921 ORTHO05D006008 8.6e-40 169.5 111 80.2
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 9.5e-39 166.0 118 71.2
C01p00710 Brassica napus HOM05D004921 ORTHO05D006008 2.1e-38 164.9 112 79.5
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 2.1e-38 164.9 118 70.3
Zm00001eb069160 Zea mays HOM05D004921 ORTHO05D006008 2.8e-38 164.5 455 33.8
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 1.6e-33 148.7 113 68.1
Cpa.g.sc82.56 Carica papaya HOM05D004921 ORTHO05D006008 3.6e-30 137.5 89 75.3
BcaNung00891 Brassica carinata HOM05D004921 ORTHO05D006008 3.4e-28 131.0 90 75.6
Dinv04895 Davidia involucrata HOM05D004921 ORTHO05D006008 7.5e-28 129.8 140 59.3
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 2.9e-27 127.9 110 58.2
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 5.4e-26 123.6 239 36.0
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 7.0e-26 123.2 93 71.0
Dinv40591 Davidia involucrata HOM05D004921 ORTHO05D006008 1.6e-25 122.1 139 57.6
Dinv32118 Davidia involucrata HOM05D004921 ORTHO05D006008 3.5e-25 120.9 140 56.4
CSS0005403 Camellia sinensis var. sinensis HOM05D004921 ORTHO05D006008 5.0e-24 117.1 326 33.4
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 6.2e-22 110.2 370 28.6
Cpa.g.sc82.54 Carica papaya HOM05D004921 ORTHO05D006008 5.4e-18 97.1 78 69.2
Dinv21952 Davidia involucrata HOM05D004921 ORTHO05D006008 1.6e-17 95.5 128 46.9
Os04g0636600 Oryza sativa ssp. japonica HOM05D004921 ORTHO05D006008 6.6e-16 90.1 396 30.6
COL.COLO4_35617 Corchorus olitorius HOM05D004921 ORTHO05D006008 1.4e-10 72.4 51 74.5
Cre08.g358950 Chlamydomonas reinhardtii HOM05D004921 ORTHO05D006008 2.4e-10 71.6 147 30.6


User provided reference genes

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