Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00328 Eucalyptus grandis HOM05D007384 ORTHO05D008511 1.4e-50 203.4 167 100.0
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 4.4e-12 75.5 162 33.3
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 3.7e-11 72.4 166 31.9
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 8.2e-11 71.2 162 34.0
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 1.4e-10 70.5 176 30.7
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 1.8e-10 70.1 157 33.1
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 5.3e-10 68.6 164 53.0
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 7.0e-10 68.2 159 35.2
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 9.1e-10 67.8 163 51.5
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 2.0e-09 66.6 176 30.1
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 2.0e-09 66.6 161 41.6
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 2.0e-09 66.6 161 41.6
Prupe.6G173600 Prunus persica HOM05D007384 ORTHO05D008511 2.0e-09 66.6 160 49.4
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 2.7e-09 66.2 157 31.8
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 2.7e-09 66.2 170 34.1
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 2.7e-09 66.2 166 50.0
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 4.5e-09 65.5 72 51.4
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 1.3e-08 63.9 164 42.7
Atru.chr4.403 Acer truncatum HOM05D007384 ORTHO05D008511 2.2e-08 63.2 174 44.8
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 2.2e-08 63.2 70 47.1
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.2e-08 63.2 160 35.0
Rhsim08G0006700 Rhododendron simsii HOM05D007384 ORTHO05D008511 5.0e-08 62.0 166 51.2
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 6.5e-08 61.6 165 30.3
PGR004G1153 Punica granatum HOM05D007384 ORTHO05D008511 8.5e-08 61.2 153 51.6
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 1.1e-07 60.8 160 40.0
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 1.5e-07 60.5 71 45.1
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 1.5e-07 60.5 164 38.4
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 1.5e-07 60.5 166 28.9
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 1.5e-07 60.5 159 29.6
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 1.9e-07 60.1 67 47.8
Phvul.002G264500 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 2.5e-07 59.7 166 42.2
Sp2g27960 Schrenkiella parvula HOM05D012887 ORTHO05D008511 2.5e-07 59.7 72 44.4
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 3.2e-07 59.3 163 34.4
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 3.2e-07 59.3 167 34.7
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 4.2e-07 58.9 163 34.4
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 5.5e-07 58.5 160 32.5
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 5.5e-07 58.5 163 53.4
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 7.2e-07 58.2 153 30.7
Carub.0008s2571 Capsella rubella HOM05D012887 ORTHO05D008511 9.4e-07 57.8 77 39.0
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 9.4e-07 57.8 174 32.2
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.6e-06 57.0 164 35.4
arahy.Tifrunner.gnm1.ann1.AK8RBW Arachis hypogaea HOM05D007384 ORTHO05D008511 2.7e-06 56.2 166 59.6
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 2.7e-06 56.2 161 29.2
BcaB02g09838 Brassica carinata HOM05D012887 ORTHO05D008511 3.6e-06 55.8 73 39.7
Lalb_Chr12g0203551 Lupinus albus HOM05D007384 ORTHO05D008511 3.6e-06 55.8 72 50.0
Sed0027168 Sechium edule HOM05D007384 ORTHO05D008511 4.7e-06 55.5 69 49.3
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 6.1e-06 55.1 163 28.2
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 6.1e-06 55.1 167 33.5
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 8.0e-06 54.7 168 25.6
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 8.0e-06 54.7 161 35.4
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 8.0e-06 54.7 168 27.4


User provided reference genes

Program Settings