Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 6.7e-111 404.1 208 100.0
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 2.2e-69 266.2 214 70.1
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 8.3e-69 264.2 208 68.3
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 7.0e-68 261.2 206 68.0
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.9e-65 253.1 208 67.8
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 4.7e-64 248.4 209 67.0
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 6.1e-64 248.1 205 64.4
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.8e-63 246.5 209 66.0
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.8e-63 246.5 208 64.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 2.3e-63 246.1 208 65.4
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 2.3e-63 246.1 208 67.8
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 3.0e-63 245.7 209 64.6
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 3.0e-63 245.7 209 64.6
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 3.0e-63 245.7 208 63.0
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 4.0e-63 245.4 205 64.4
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 5.2e-63 245.0 210 65.2
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 8.9e-63 244.2 209 63.6
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.2e-62 243.8 208 66.3
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 9.8e-62 240.7 208 63.0
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 2.2e-61 239.6 206 64.1
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.2e-61 239.6 205 62.9
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 3.7e-61 238.8 208 61.1
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 3.7e-61 238.8 208 64.9
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 6.3e-61 238.0 208 61.1
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.1e-60 237.3 209 63.6
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.1e-60 237.3 209 63.6
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 3.1e-60 235.7 208 63.5
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 4.1e-60 235.3 220 61.4
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 4.1e-60 235.3 209 63.2
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 4.1e-60 235.3 208 64.9
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 4.1e-60 235.3 209 63.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 5.4e-60 235.0 207 64.3
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 7.0e-60 234.6 209 60.8
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 2.7e-59 232.6 211 61.6
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.7e-59 232.6 206 61.7
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 3.5e-59 232.3 208 64.4
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 4.5e-59 231.9 206 64.6
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 5.9e-59 231.5 208 63.0
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 1.0e-58 230.7 208 62.0
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.3e-58 230.3 185 67.6
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.3e-58 230.3 206 64.1
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 3.8e-58 228.8 208 58.7
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.1e-57 227.3 209 62.7
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.9e-57 226.5 211 60.7
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.5e-57 226.1 209 62.2
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.6e-57 224.9 209 62.7
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.1e-56 223.0 207 59.9
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 2.8e-56 222.6 209 57.4
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 2.8e-56 222.6 179 67.0
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.8e-56 222.6 210 58.1
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 4.7e-56 221.9 209 58.4
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 4.7e-56 221.9 209 58.4
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 4.7e-56 221.9 209 58.4
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 4.7e-56 221.9 208 62.0
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 6.1e-56 221.5 209 58.4
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 6.1e-56 221.5 213 58.2
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 6.1e-56 221.5 206 61.2
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 1.4e-55 220.3 209 57.9
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.4e-55 220.3 207 60.4
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.8e-55 219.9 206 61.7
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 6.8e-55 218.0 206 59.7
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 6.8e-55 218.0 216 58.8
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.6e-54 216.1 209 58.4
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.6e-54 216.1 205 61.5
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 3.4e-54 215.7 216 58.3
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 5.8e-54 214.9 211 56.4
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 7.5e-54 214.5 198 62.6
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 9.8e-54 214.2 197 61.9
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 9.8e-54 214.2 213 58.2
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 9.8e-54 214.2 209 58.4
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 1.3e-53 213.8 219 56.6
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.7e-53 213.4 209 57.9
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 3.7e-53 212.2 184 62.5
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 3.7e-53 212.2 206 58.3
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 1.1e-52 210.7 214 56.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.4e-52 210.3 215 55.8
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 5.4e-52 208.4 208 54.8
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.6e-51 206.8 205 56.6
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.6e-51 206.8 198 60.1
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.0e-51 206.5 158 69.6
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 2.0e-51 206.5 148 71.6
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.0e-51 206.5 194 58.8
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.7e-51 206.1 180 62.2
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.5e-49 200.3 199 58.8
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 8.0e-48 194.5 192 57.3
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 1.1e-47 194.1 204 57.4
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.3e-47 193.0 210 52.4
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 2.3e-47 193.0 202 53.0
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 4.4e-46 188.7 188 52.1
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.3e-45 187.2 168 58.3
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.7e-45 186.8 209 50.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 6.4e-45 184.9 212 49.5
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.1e-44 184.1 208 50.0
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.9e-44 183.3 209 49.8
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 5.4e-44 181.8 212 51.4
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 6.0e-43 178.3 214 49.5
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 7.8e-43 177.9 208 51.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.0e-42 177.6 219 51.1
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.0e-42 177.6 151 60.3
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 4.7e-40 168.7 158 55.1
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 6.4e-37 158.3 149 57.0
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 7.3e-33 144.8 151 49.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.6e-27 127.1 142 50.0
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.1e-27 126.7 92 64.1
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.2e-24 117.5 146 46.6
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.9e-20 103.6 122 53.3
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 1.0e-18 97.8 161 35.4
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 7.3e-17 91.7 126 51.6
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.7e-13 80.5 144 29.9
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 4.9e-13 79.0 152 30.9
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 6.4e-13 78.6 157 33.8
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.1e-12 77.8 147 34.0
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.6e-11 73.9 144 31.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 3.5e-11 72.8 70 50.0
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 4.6e-11 72.4 84 45.2
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.0e-10 71.2 144 31.9


User provided reference genes

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