Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 3.5e-43 177.9 94 100.0
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.4e-38 161.4 94 88.3
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.4e-38 161.4 94 88.3
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 3.4e-38 161.4 94 88.3
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 5.8e-38 160.6 94 88.3
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 6.4e-37 157.1 94 86.2
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 8.4e-37 156.8 94 85.1
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 8.4e-37 156.8 86 91.9
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 84.0
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 2.4e-36 155.2 93 84.9
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 85.1
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 85.1
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 2.4e-36 155.2 93 83.9
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 84.0
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 5.4e-36 154.1 94 84.0
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 84.0
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 85.1
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 9.3e-36 153.3 94 85.1
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 84.0
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 1.2e-35 152.9 93 82.8
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 84.0
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 1.6e-35 152.5 85 90.6
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 2.1e-35 152.1 93 82.8
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 2.1e-35 152.1 94 83.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 2.1e-35 152.1 86 90.7
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 4.6e-35 151.0 86 87.2
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 84.0
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 84.0
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 84.0
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 84.0
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 81.9
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 7.9e-35 150.2 89 86.5
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.3e-34 149.4 86 88.4
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.3e-34 149.4 86 88.4
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.3e-34 149.4 86 88.4
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 1.3e-34 149.4 94 80.9
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 1.3e-34 149.4 94 83.0
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.8e-34 149.1 94 83.0
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.3e-34 148.7 86 87.2
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 3.0e-34 148.3 94 83.0
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 79.8
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.1e-33 146.4 96 81.2
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 80.9
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 1.9e-33 145.6 87 80.5
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.5e-33 145.2 94 80.9
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 3.3e-33 144.8 95 82.1
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 3.3e-33 144.8 86 83.7
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 3.3e-33 144.8 86 84.9
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 3.3e-33 144.8 85 85.9
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.3e-33 144.8 86 83.7
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 4.3e-33 144.4 86 82.6
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 4.3e-33 144.4 86 82.6
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 4.3e-33 144.4 94 80.9
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 7.4e-33 143.7 93 81.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 7.4e-33 143.7 93 81.7
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 7.4e-33 143.7 94 81.9
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 9.6e-33 143.3 92 79.3
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 97 78.4
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 3.7e-32 141.4 80 90.0
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 4.8e-32 141.0 94 77.7
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 6.2e-32 140.6 80 88.8
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 6.2e-32 140.6 94 78.7
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 8.1e-32 140.2 92 78.3
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 8.1e-32 140.2 94 77.7
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 1.1e-31 139.8 92 79.3
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 1.1e-31 139.8 92 79.3
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 1.1e-31 139.8 92 79.3
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.8e-31 139.0 85 83.5
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 2.4e-31 138.7 92 78.3
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.4e-31 138.7 96 77.1
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 3.1e-31 138.3 92 78.3
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 3.1e-31 138.3 86 81.4
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 6.9e-31 137.1 79 87.3
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 6.9e-31 137.1 86 79.1
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 9.0e-31 136.7 85 82.4
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 9.0e-31 136.7 96 77.1
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 1.2e-30 136.3 79 87.3
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 1.2e-30 136.3 87 83.9
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.5e-30 136.0 93 74.2
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.5e-30 136.0 86 80.2
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.5e-30 136.0 90 77.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.5e-30 136.0 90 77.8
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 2.6e-30 135.2 85 82.4
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 7.6e-30 133.7 82 82.9
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 9.9e-30 133.3 87 79.3
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.7e-29 132.5 83 79.5
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 8.4e-29 130.2 94 75.5
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 1.1e-28 129.8 92 69.6
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 1.9e-28 129.0 93 71.0
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 2.1e-27 125.6 90 73.3
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 2.1e-27 125.6 86 74.4
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 6.0e-27 124.0 94 68.1
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 1.3e-26 122.9 150 50.7
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 3.9e-26 121.3 65 92.3
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 8.7e-26 120.2 83 69.9
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 1.1e-25 119.8 64 92.2
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 1.9e-25 119.0 75 81.3
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.3e-25 118.2 84 72.6
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 4.3e-25 117.9 80 76.2
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 4.3e-25 117.9 73 82.2
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.6e-24 115.9 73 82.2
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.6e-24 115.9 80 77.5
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.6e-24 115.9 92 66.3
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 2.1e-24 115.5 88 71.6
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 2.8e-24 115.2 68 85.3
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 3.7e-24 114.8 73 79.5
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 9.0e-23 110.2 76 75.0
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.0e-21 106.7 64 82.8
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 1.7e-21 105.9 73 75.3
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.9e-21 105.1 64 79.7
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 3.8e-21 104.8 63 82.5
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 6.5e-21 104.0 92 63.0
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 6.5e-21 104.0 80 67.5
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 3.0e-18 95.1 79 63.3
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 4.3e-17 91.3 69 66.7
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.6e-16 89.4 108 51.9


User provided reference genes

Program Settings