Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 4.6e-42 174.1 85 100.0
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 5.3e-38 160.6 85 91.8
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 2.1e-34 148.7 83 86.7
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.8e-33 145.6 76 92.1
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 7.9e-26 120.2 78 75.6
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 6.7e-25 117.1 76 72.4
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.5e-24 115.9 79 70.9
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.9e-24 115.5 79 69.6
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 2.5e-24 115.2 75 68.0
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 3.3e-24 114.8 78 70.5
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 4.3e-24 114.4 73 71.2
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 7.4e-24 113.6 76 65.8
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 3.7e-23 111.3 78 70.5
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 6.2e-23 110.5 73 67.1
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 8.2e-23 110.2 78 66.7
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.1e-22 109.8 77 68.8
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.1e-22 109.8 77 68.8
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.4e-22 109.4 70 71.4
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.8e-22 109.0 76 65.8
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 1.8e-22 109.0 77 68.8
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 2.4e-22 108.6 79 67.1
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 3.1e-22 108.2 73 65.8
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 3.1e-22 108.2 73 67.1
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 4.0e-22 107.8 76 67.1
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 5.3e-22 107.5 78 69.2
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 9.0e-22 106.7 78 70.5
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.2e-21 106.3 73 67.1
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 1.5e-21 105.9 73 67.1
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 2.0e-21 105.5 73 67.1
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 2.0e-21 105.5 73 67.1
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.6e-21 105.1 70 68.6
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 2.6e-21 105.1 73 65.8
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 3.4e-21 104.8 78 67.9
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 4.5e-21 104.4 73 67.1
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 4.5e-21 104.4 73 65.8
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 5.8e-21 104.0 79 67.1
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 5.8e-21 104.0 92 60.9
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 7.6e-21 103.6 73 65.8
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 1.7e-20 102.4 78 66.7
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.7e-20 102.4 92 55.4
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 1.7e-20 102.4 71 64.8
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 1.7e-20 102.4 79 63.3
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.7e-20 102.4 73 64.4
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-20 102.1 72 70.8
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 2.2e-20 102.1 78 64.1
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 2.9e-20 101.7 70 67.1
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 2.9e-20 101.7 78 62.8
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 3.8e-20 101.3 70 67.1
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 4.9e-20 100.9 77 63.6
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 4.9e-20 100.9 76 61.8
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 1.1e-19 99.8 70 65.7
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 1.1e-19 99.8 71 63.4
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.1e-19 99.8 70 65.7
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 1.1e-19 99.8 76 64.5
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 1.4e-19 99.4 69 66.7
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.4e-19 99.4 71 63.4
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 1.9e-19 99.0 73 63.0
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 1.9e-19 99.0 73 63.0
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 2.5e-19 98.6 71 63.4
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.5e-19 98.6 76 64.5
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 2.5e-19 98.6 79 62.0
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 3.2e-19 98.2 70 62.9
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 3.2e-19 98.2 69 65.2
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 4.2e-19 97.8 69 63.8
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.5e-19 97.4 63 66.7
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 5.5e-19 97.4 63 66.7
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 5.5e-19 97.4 78 59.0
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 7.1e-19 97.1 78 60.3
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 7.1e-19 97.1 73 60.3
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 7.1e-19 97.1 69 63.8
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 7.1e-19 97.1 69 65.2
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 7.1e-19 97.1 78 59.0
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 9.3e-19 96.7 73 60.3
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 9.3e-19 96.7 73 60.3
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 9.3e-19 96.7 85 55.3
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 9.3e-19 96.7 69 62.3
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 1.2e-18 96.3 78 59.0
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.2e-18 96.3 69 62.3
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.6e-18 95.9 74 60.8
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.6e-18 95.9 70 64.3
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.6e-18 95.9 70 64.3
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 2.1e-18 95.5 76 57.9
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 2.1e-18 95.5 69 63.8
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 2.7e-18 95.1 54 77.8
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 4.6e-18 94.4 69 60.9
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 4.6e-18 94.4 69 60.9
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 7.9e-18 93.6 76 56.6
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 7.9e-18 93.6 72 56.9
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 7.9e-18 93.6 72 56.9
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 7.9e-18 93.6 73 60.3
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 1.0e-17 93.2 70 62.9
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.8e-17 92.4 73 56.2
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.8e-17 92.4 75 58.7
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 2.3e-17 92.0 71 57.7
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 3.0e-17 91.7 73 58.9
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 3.9e-17 91.3 78 57.7
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 3.9e-17 91.3 80 57.5
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 3.9e-17 91.3 79 57.0
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 6.7e-17 90.5 79 57.0
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 6.7e-17 90.5 73 57.5
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 6.7e-17 90.5 79 55.7
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 8.7e-17 90.1 79 55.7
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 8.7e-17 90.1 79 57.0
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 8.7e-17 90.1 79 57.0
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 8.7e-17 90.1 80 56.2
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 8.7e-17 90.1 73 57.5
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 1.1e-16 89.7 80 52.5
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 1.5e-16 89.4 79 53.2
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.5e-16 89.4 72 56.9
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 1.5e-16 89.4 78 55.1
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 2.5e-16 88.6 79 55.7
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 2.5e-16 88.6 65 60.0
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 3.3e-16 88.2 72 56.9
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 3.3e-16 88.2 72 56.9
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 3.3e-16 88.2 72 56.9
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 3.3e-16 88.2 72 56.9
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 4.3e-16 87.8 61 65.6
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 1.6e-15 85.9 73 54.8
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 2.2e-15 85.5 71 56.3
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.1e-14 83.2 59 66.1
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 3.4e-13 78.2 50 66.0
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 3.4e-13 78.2 66 50.0
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 6.5e-12 73.9 58 51.7
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 3.6e-10 68.2 52 57.7
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 3.7e-07 58.2 71 39.4
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 1.4e-06 56.2 70 37.1


User provided reference genes

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