Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00129 Eucalyptus grandis HOM05D007623 ORTHO05D009641 1.7e-52 211.5 554 100.0
CiPaw.06G095500 Carya illinoinensis HOM05D007623 ORTHO05D009641 1.7e-23 115.2 86 65.1
Prupe.2G062100 Prunus persica HOM05D007623 ORTHO05D009641 7.9e-18 96.3 81 58.0
Cpa.g.sc998.1 Carica papaya HOM05D007623 ORTHO05D021352 3.0e-17 94.4 83 55.4
PGSC0003DMG400019642 Solanum tuberosum HOM05D007623 ORTHO05D009641 5.9e-13 80.1 79 60.8
CAN.G680.12 Capsicum annuum HOM05D007623 ORTHO05D009641 7.7e-13 79.7 82 53.7
Solyc05g010780.1 Solanum lycopersicum HOM05D007623 ORTHO05D009641 1.0e-12 79.3 80 58.8
Sopen00g002400 Solanum pennellii HOM05D007623 ORTHO05D009641 2.2e-12 78.2 80 57.5
Migut.E00256 Erythranthe guttata HOM05D007623 ORTHO05D009641 8.5e-12 76.3 81 50.6
vmacro01293 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.5e-11 75.5 63 63.5
Potri.010G137200 Populus trichocarpa HOM05D007623 ORTHO05D009641 1.6e-10 72.0 59 57.6
FvH4_4g29120 Fragaria vesca HOM05D007623 ORTHO05D009641 2.1e-10 71.6 58 58.6
MD16G1054700 Malus domestica HOM05D007623 ORTHO05D009641 2.7e-10 71.2 55 58.2
Prupe.7G020200 Prunus persica HOM05D030010 ORTHO05D021352 1.4e-09 68.9 62 54.8
Aqoxy1G02998 Aquilegia oxysepala HOM05D007623 ORTHO05D021352 2.3e-09 68.2 79 46.8
Sabra10G0105800 Salix brachista HOM05D007623 ORTHO05D009641 2.3e-09 68.2 56 58.9
DCAR_023738 Daucus carota HOM05D007623 ORTHO05D009641 1.1e-08 65.9 67 52.2
Rhsim12G0070700 Rhododendron simsii HOM05D007623 ORTHO05D009641 2.0e-08 65.1 64 56.2
Gorai.005G147900 Gossypium raimondii HOM05D007623 ORTHO05D009641 7.5e-08 63.2 58 53.4
ECA233G1899 Erigeron canadensis HOM05D000630 ORTHO05D001413 9.7e-08 62.8 55 56.4
HanXRQChr08g0215011 Helianthus annuus HOM05D007623 ORTHO05D009641 1.7e-07 62.0 40 70.0
FAN12G1349 Fragaria x ananassa HOM05D007623 ORTHO05D009641 6.3e-07 60.1 50 52.0
Aa31LG7G1940 Aethionema arabicum HOM05D007623 ORTHO05D009641 1.1e-06 59.3 42 59.5
Cfa008839 Carpinus fangiana HOM05D007623 ORTHO05D009641 1.1e-06 59.3 40 67.5
Thhalv10023152m.g Eutrema salsugineum HOM05D007623 ORTHO05D009641 1.1e-06 59.3 42 59.5
Haze_11851 Corylus avellana HOM05D007623 ORTHO05D009641 1.8e-06 58.5 38 68.4
Manes.14G091100 Manihot esculenta HOM05D007623 ORTHO05D009641 1.8e-06 58.5 46 58.7
FAN22G0497 Fragaria x ananassa HOM05D007623 ORTHO05D009641 4.1e-06 57.4 46 52.2
CANSAT64G0130 Cannabis sativa HOM05D007623 ORTHO05D009641 7.0e-06 56.6 48 54.2
COL.COLO4_27779 Corchorus olitorius HOM05D007623 ORTHO05D009641 7.0e-06 56.6 51 47.1
Actinidia24041 Actinidia chinensis HOM05D007623 ORTHO05D009641 9.1e-06 56.2 46 65.2


User provided reference genes

Program Settings