Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 4.7e-175 617.8 331 100.0
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 7.4e-112 407.9 341 67.7
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 3.1e-110 402.5 337 69.4
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 1.7e-108 396.7 244 81.6
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 5.5e-107 391.7 295 69.2
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 7.1e-107 391.3 281 70.1
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 9.3e-107 391.0 286 70.3
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 9.3e-107 391.0 252 76.6
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 1.6e-106 390.2 253 78.3
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.6e-106 390.2 281 69.8
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 7.9e-106 387.9 255 76.9
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 1.0e-105 387.5 286 69.9
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.8e-105 386.7 303 68.3
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 3.9e-105 385.6 326 65.3
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 3.9e-105 385.6 246 78.0
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 6.7e-105 384.8 345 63.8
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.5e-104 382.9 246 77.2
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 3.3e-104 382.5 283 70.3
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 5.7e-104 381.7 216 83.8
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 2.1e-103 379.8 292 74.3
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 2.1e-103 379.8 341 66.6
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 3.7e-103 379.0 276 71.7
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 4.8e-103 378.6 344 64.2
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 4.8e-103 378.6 283 67.1
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 1.2e-101 374.0 218 83.5
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 2.6e-101 372.9 218 82.6
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 2.9e-100 369.4 218 83.0
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 8.4e-100 367.9 215 81.4
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 2.5e-99 366.3 220 79.5
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 3.2e-99 365.9 218 77.1
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 3.2e-99 365.9 343 65.3
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 3.2e-99 365.9 212 80.2
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 7.2e-99 364.8 215 80.9
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 9.3e-99 364.4 343 65.0
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.6e-98 363.6 220 84.5
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 2.1e-98 363.2 214 81.3
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.1e-98 363.2 218 78.4
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 6.1e-98 361.7 333 60.7
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.8e-97 360.1 221 80.5
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 2.3e-97 359.8 338 59.8
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 3.9e-97 359.0 218 79.4
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 3.9e-97 359.0 244 74.2
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.1e-96 357.5 204 85.3
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 1.5e-96 357.1 218 78.4
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 2.5e-96 356.3 345 61.2
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 5.7e-96 355.1 318 63.5
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 1.3e-95 354.0 293 67.6
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 2.8e-95 352.8 302 62.6
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 2.8e-95 352.8 339 58.1
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 3.7e-95 352.4 214 79.4
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 6.3e-95 351.7 330 59.1
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.1e-94 350.9 279 65.6
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 3.1e-94 349.4 275 62.9
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 2.6e-93 346.3 216 75.0
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.0e-92 344.4 359 59.1
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 1.3e-92 344.0 421 53.0
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 7.2e-91 338.2 301 59.1
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 1.2e-90 337.4 219 76.7
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 2.1e-90 336.7 321 60.4
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 6.1e-90 335.1 313 58.8
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 1.8e-89 333.6 330 57.6
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.8e-89 333.6 198 82.3
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 8.8e-89 331.3 205 73.2
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 2.0e-88 330.1 289 60.9
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 1.3e-87 327.4 347 59.9
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 8.2e-87 324.7 336 56.5
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 1.1e-86 324.3 196 79.6
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 4.1e-86 322.4 211 70.6
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 9.1e-86 321.2 308 60.4
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 9.1e-86 321.2 218 73.4
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 1.2e-85 320.9 196 79.1
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 2.0e-85 320.1 307 57.7
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.3e-84 317.4 286 59.1
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.7e-84 317.0 186 78.5
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 6.5e-84 315.1 174 86.8
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 5.5e-83 312.0 346 55.5
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 7.2e-83 311.6 288 54.9
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 2.1e-82 310.1 216 70.4
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 6.1e-82 308.5 176 81.8
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 2.3e-81 306.6 306 61.8
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.0e-81 306.2 336 50.0
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 2.0e-80 303.5 216 72.2
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 3.3e-80 302.8 215 68.8
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 4.8e-79 298.9 309 51.5
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 6.3e-79 298.5 213 70.9
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.4e-78 296.6 202 68.3
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 4.1e-78 295.8 216 70.8
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 9.1e-78 294.7 229 65.5
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 3.5e-77 292.7 213 68.5
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 3.8e-76 289.3 219 63.0
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 1.6e-74 283.9 208 64.4
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 5.7e-72 275.4 283 51.9
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.9e-67 260.4 256 56.6
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.9e-67 260.4 256 56.6
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.0e-65 254.6 187 66.8
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.5e-64 250.8 338 49.1
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 8.3e-63 245.0 179 69.8
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 1.5e-59 234.2 168 68.5
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 4.2e-59 232.6 192 63.0
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 5.5e-59 232.3 212 57.1
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 1.5e-56 224.2 213 52.6
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 6.3e-55 218.8 292 45.9
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 6.3e-55 218.8 215 52.6
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 3.5e-53 213.0 249 47.0
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 3.5e-53 213.0 243 56.0
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 3.5e-53 213.0 127 79.5
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.7e-52 210.7 242 50.8
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 2.9e-47 193.4 170 58.8
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 4.9e-47 192.6 192 50.5
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 5.9e-45 185.7 313 41.5
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 4.9e-39 166.0 90 86.7
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.6e-37 161.0 90 83.3
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 5.6e-35 152.5 81 85.2
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 2.3e-25 120.6 233 33.0
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 5.2e-25 119.4 69 85.5
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.1e-21 107.5 62 85.5
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 1.0e-20 105.1 156 39.1
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 4.3e-19 99.8 168 32.7
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 5.6e-19 99.4 177 36.2
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 5.1e-12 76.3 48 79.2
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.6e-12 75.9 48 81.2
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 8.7e-12 75.5 67 58.2
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.7e-07 61.2 37 86.5


User provided reference genes

Program Settings