Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00024 Eucalyptus grandis HOM05D007044 ORTHO05D008981 7.9e-172 607.1 316 100.0
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 9.9e-90 334.3 316 54.7
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 2.8e-84 316.2 320 53.1
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 1.1e-83 314.3 320 53.4
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 2.4e-83 313.2 315 57.8
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 6.9e-83 311.6 327 54.1
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 9.0e-83 311.2 301 57.1
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 1.5e-82 310.5 314 52.9
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 2.6e-82 309.7 299 54.2
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 1.7e-81 307.0 309 52.4
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 1.7e-81 307.0 297 55.2
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 2.9e-81 306.2 316 57.0
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 4.9e-81 305.4 317 50.5
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 4.9e-81 305.4 299 53.2
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 8.4e-81 304.7 322 52.8
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 1.1e-80 304.3 303 55.8
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 7.1e-80 301.6 317 52.1
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 9.3e-80 301.2 314 52.5
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 9.3e-80 301.2 323 52.6
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 2.7e-79 299.7 301 54.5
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 3.5e-79 299.3 320 53.4
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 6.0e-79 298.5 305 55.1
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 6.0e-79 298.5 300 52.0
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 1.0e-78 297.7 310 52.3
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 1.0e-78 297.7 299 52.2
QL10p037675 Quercus lobata HOM05D007044 ORTHO05D008981 1.7e-78 297.0 301 53.2
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 2.3e-78 296.6 301 52.2
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 5.1e-78 295.4 313 53.0
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 4.3e-77 292.4 315 52.1
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 4.3e-77 292.4 319 51.7
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 7.3e-77 291.6 310 51.9
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 7.3e-77 291.6 300 52.3
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 1.3e-76 290.8 302 52.6
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 1.6e-76 290.4 300 53.0
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 1.6e-76 290.4 309 52.8
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 3.6e-76 289.3 305 52.1
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 4.8e-76 288.9 307 51.8
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 6.2e-76 288.5 302 52.6
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 1.1e-75 287.7 343 47.8
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 1.4e-75 287.3 317 50.5
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 2.4e-75 286.6 313 51.8
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 6.9e-75 285.0 306 50.7
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 9.0e-75 284.6 308 51.0
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 2.6e-74 283.1 310 51.0
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 5.8e-74 282.0 284 54.6
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 1.3e-73 280.8 337 48.1
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 1.7e-73 280.4 258 58.9
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 1.7e-73 280.4 319 49.8
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 2.2e-73 280.0 314 53.8
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 3.8e-73 279.3 304 51.6
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 3.8e-73 279.3 315 50.8
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 1.4e-72 277.3 303 50.5
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 3.2e-72 276.2 315 49.8
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 3.2e-72 276.2 325 49.8
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 4.6e-71 272.3 298 50.0
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 6.0e-71 271.9 298 48.7
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 6.0e-71 271.9 298 50.0
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 2.3e-70 270.0 307 50.5
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 2.3e-70 270.0 301 52.2
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 6.7e-70 268.5 332 47.3
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 4.3e-69 265.8 324 47.8
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 3.7e-68 262.7 309 49.5
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 4.8e-68 262.3 326 47.2
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 4.8e-68 262.3 299 51.8
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 4.8e-68 262.3 299 51.8
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 8.1e-68 261.5 306 45.8
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 8.1e-68 261.5 309 48.2
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 1.1e-67 261.2 326 46.6
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 2.4e-67 260.0 327 46.5
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 9.0e-67 258.1 333 45.6
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 1.2e-66 257.7 318 46.5
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 1.2e-66 257.7 311 48.2
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 3.4e-66 256.1 326 47.9
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 4.5e-66 255.8 334 45.5
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 8.4e-65 251.5 300 50.0
Glyma.10G176100 Glycine max HOM05D007044 ORTHO05D008981 1.9e-64 250.4 276 50.4
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 7.1e-64 248.4 327 45.3
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 1.6e-63 247.3 299 48.8
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 8.7e-62 241.5 380 41.6
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 1.3e-60 237.7 248 54.8
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 1.1e-59 234.6 352 39.5
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 1.2e-58 231.1 288 44.8
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 3.4e-58 229.6 344 43.0
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 1.0e-57 228.0 323 44.6
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 2.5e-56 223.4 321 43.3
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 2.5e-56 223.4 321 43.3
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 1.3e-54 217.6 336 41.7
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 1.3e-54 217.6 336 41.7
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 1.5e-53 214.2 306 42.8
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 7.9e-39 165.2 354 32.8
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 7.9e-39 165.2 303 37.6
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 9.7e-37 158.3 202 45.0
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 3.1e-35 153.3 290 34.8
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 2.0e-34 150.6 250 36.8
MELO3C033209.2 Cucumis melo HOM05D007044 ORTHO05D008981 4.5e-34 149.4 161 54.7
CBR_g30110 Chara braunii HOM05D007044 ORTHO05D008981 1.0e-22 111.7 139 39.6
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 1.7e-09 67.8 291 24.1
MCO15G559 Micromonas commoda HOM05D007044 ORTHO05D008981 8.0e-07 58.9 184 33.2
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 1.4e-06 58.2 190 30.5


User provided reference genes

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