Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.5e-272 942.2 469 100.0
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 2.3e-98 363.6 707 34.7
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.5e-97 360.9 701 35.9
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 3.3e-97 359.8 695 35.3
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 2.1e-96 357.1 709 35.0
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 1.8e-95 354.0 705 34.9
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 1.7e-93 347.4 683 34.1
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 3.7e-93 346.3 707 33.9
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.1e-92 344.7 692 35.4
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 9.2e-92 341.7 692 35.3
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 2.7e-91 340.1 708 33.6
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 8.6e-90 335.1 707 33.5
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 8.6e-90 335.1 696 33.9
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 3.3e-89 333.2 702 35.2
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 5.6e-89 332.4 673 34.2
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 5.6e-89 332.4 713 33.2
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 8.0e-88 328.6 722 33.1
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 5.2e-87 325.9 722 32.8
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 8.9e-87 325.1 594 36.0
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 3.4e-86 323.2 323 61.6
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 2.9e-85 320.1 682 33.3
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 1.4e-84 317.8 694 32.9
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 3.2e-84 316.6 682 33.0
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 1.2e-83 314.7 706 32.7
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 1.2e-83 314.7 707 31.8
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 6.0e-83 312.4 680 34.1
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 7.8e-83 312.0 693 33.6
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.0e-82 311.6 698 32.5
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.0e-82 311.6 698 32.1
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 5.1e-82 309.3 680 32.9
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 1.9e-81 307.4 704 33.4
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 4.3e-81 306.2 698 31.8
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 1.2e-80 304.7 668 32.6
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 2.8e-80 303.5 697 32.0
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 3.6e-80 303.1 705 32.5
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.8e-79 300.8 693 33.2
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 5.2e-79 299.3 697 32.4
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 2.0e-78 297.4 701 32.0
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 2.6e-78 297.0 713 31.7
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 7.6e-78 295.4 690 30.4
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 1.7e-77 294.3 684 32.6
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 3.7e-77 293.1 694 30.4
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 8.3e-77 292.0 701 31.2
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 9.2e-76 288.5 691 31.0
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 4.6e-75 286.2 707 29.4
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 6.0e-75 285.8 703 31.3
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.0e-74 285.0 689 31.6
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 1.0e-74 285.0 692 31.8
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 1.3e-74 284.6 756 30.0
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 2.3e-74 283.9 689 31.6
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 3.9e-74 283.1 699 31.0
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.1e-73 281.6 710 30.6
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 1.1e-73 281.6 688 31.2
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 1.9e-73 280.8 708 31.2
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 2.5e-73 280.4 697 30.6
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 3.3e-73 280.0 707 30.0
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 5.6e-73 279.3 693 30.4
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 5.6e-73 279.3 564 34.9
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 5.6e-73 279.3 557 34.6
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 9.6e-73 278.5 663 32.9
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 9.6e-73 278.5 676 32.2
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 2.1e-72 277.3 688 30.4
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 6.2e-72 275.8 687 30.9
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 2.4e-71 273.9 710 30.3
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 3.4e-70 270.0 694 31.6
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 5.8e-70 269.2 702 30.2
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 3.8e-69 266.5 694 31.4
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 4.9e-69 266.2 664 31.0
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 8.4e-69 265.4 706 29.7
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 1.1e-68 265.0 695 29.6
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 1.2e-67 261.5 654 30.0
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 8.1e-64 248.8 695 30.5
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 1.1e-63 248.4 696 27.9
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 4.4e-62 243.0 477 34.6
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 3.8e-61 240.0 710 30.0
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 3.2e-60 236.9 402 39.3
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 2.7e-59 233.8 467 35.3
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 1.0e-58 231.9 663 28.1
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 3.3e-57 226.9 473 33.0
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 8.1e-56 222.2 416 36.3
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 3.8e-53 213.4 399 35.8
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 3.8e-53 213.4 485 31.5
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 6.4e-53 212.6 416 36.1
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 1.1e-52 211.8 415 34.5
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 5.4e-52 209.5 549 29.9
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 1.6e-51 208.0 429 33.6
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 8.7e-50 202.2 544 30.3
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 1.3e-48 198.4 507 31.2
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 4.8e-48 196.4 514 29.4
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.8e-47 194.5 420 33.6
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 2.4e-47 194.1 549 29.9
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 4.0e-47 193.4 408 33.1
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 2.0e-46 191.0 595 28.6
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 3.5e-43 180.3 607 27.7
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 9.6e-41 172.2 579 26.9
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 1.4e-36 158.3 392 30.9
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 4.3e-33 146.7 214 41.1
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.2e-29 134.4 350 30.9
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 3.8e-29 133.7 131 57.3
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 7.9e-27 125.9 270 33.7
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 3.9e-26 123.6 690 22.9
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 3.9e-26 123.6 690 22.9
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 1.3e-24 118.6 223 33.6
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 6.3e-24 116.3 141 46.8
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.5e-22 111.7 348 27.9
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 2.5e-20 104.4 342 27.5
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 5.5e-20 103.2 145 42.8
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 1.2e-19 102.1 113 41.6
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 3.0e-18 97.4 357 26.9
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 1.1e-17 95.5 146 39.0
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 8.2e-16 89.4 130 38.5
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 7.0e-15 86.3 174 35.1
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 2.6e-14 84.3 184 31.0
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 6.5e-13 79.7 108 43.5
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 1.2e-11 75.5 92 44.6
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.2e-08 64.7 117 37.6
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 1.4e-07 62.0 130 36.2


User provided reference genes

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