Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 6.7e-81 303.9 149 100.0
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 3.3e-43 178.7 146 59.6
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 3.3e-43 178.7 146 59.6
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 4.7e-42 174.9 146 57.5
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 1.1e-41 173.7 146 60.3
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 6.8e-41 171.0 146 56.8
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 1.2e-40 170.2 146 55.5
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.5e-40 169.9 148 57.4
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 2.0e-40 169.5 149 57.0
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 2.6e-40 169.1 146 55.5
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 5.8e-40 167.9 146 57.5
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 9.9e-40 167.2 148 57.4
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.3e-39 166.8 149 58.4
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.7e-39 166.4 146 56.8
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 3.7e-39 165.2 146 56.8
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 4.9e-39 164.9 146 56.8
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 4.9e-39 164.9 146 56.8
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 4.9e-39 164.9 146 56.8
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 6.4e-39 164.5 149 55.7
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 8.3e-39 164.1 146 55.5
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 8.3e-39 164.1 146 52.7
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 8.3e-39 164.1 146 56.2
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 8.3e-39 164.1 146 53.4
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 8.3e-39 164.1 146 56.2
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.1e-38 163.7 149 57.0
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 1.4e-38 163.3 146 57.5
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 1.4e-38 163.3 146 53.4
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.9e-38 162.9 146 55.5
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 2.4e-38 162.5 146 56.2
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 2.4e-38 162.5 146 55.5
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 3.2e-38 162.2 149 56.4
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 2.7e-37 159.1 146 54.1
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 3.5e-37 158.7 146 53.4
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 3.5e-37 158.7 146 55.5
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 3.5e-37 158.7 146 54.8
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 4.6e-37 158.3 146 52.7
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 4.6e-37 158.3 146 53.4
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 7.8e-37 157.5 146 54.8
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 1.3e-36 156.8 149 53.0
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 1.7e-36 156.4 144 54.9
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 3.0e-36 155.6 149 55.0
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 3.9e-36 155.2 146 52.1
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 6.6e-36 154.5 149 52.3
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 8.6e-36 154.1 146 51.4
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 5.6e-35 151.4 147 55.8
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 9.5e-35 150.6 146 54.8
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 2.8e-34 149.1 146 51.4
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 2.8e-34 149.1 146 52.1
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 3.6e-34 148.7 146 48.6
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 8.1e-34 147.5 152 50.0
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 1.1e-33 147.1 146 50.7
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 4.0e-33 145.2 147 50.3
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 4.0e-33 145.2 148 48.6
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 6.8e-33 144.4 146 52.7
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 6.8e-33 144.4 147 49.0
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 6.8e-33 144.4 146 50.0
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 8.9e-33 144.1 146 49.3
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 8.9e-33 144.1 146 50.0
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 1.2e-32 143.7 147 50.3
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 2.6e-32 142.5 146 50.0
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 3.4e-32 142.1 148 47.3
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 9.9e-32 140.6 148 47.3
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 9.9e-32 140.6 146 50.0
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 1.3e-31 140.2 154 48.7
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 1.7e-31 139.8 145 48.3
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 1.7e-31 139.8 146 47.3
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 2.9e-31 139.0 146 47.9
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 8.4e-31 137.5 145 49.0
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 8.4e-31 137.5 146 47.3
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 3.2e-30 135.6 147 46.3
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 5.4e-30 134.8 146 50.7
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 3.5e-29 132.1 146 50.7
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 4.6e-29 131.7 131 53.4
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 6.0e-29 131.3 131 57.3
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.0e-28 130.6 149 47.0
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 2.3e-28 129.4 148 45.3
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 6.6e-28 127.9 146 47.9
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 1.5e-27 126.7 117 54.7
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 3.3e-27 125.6 146 45.9
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 1.2e-26 123.6 146 41.8
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 1.2e-24 117.1 146 45.2
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 4.4e-24 115.2 131 45.8
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 3.8e-23 112.1 131 45.8
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 9.3e-22 107.5 110 50.9
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 3.3e-19 99.0 117 46.2
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 5.6e-19 98.2 117 47.9
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 1.3e-18 97.1 59 72.9
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 1.3e-18 97.1 148 41.2
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 1.4e-17 93.6 144 41.7
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 3.1e-17 92.4 106 43.4
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.6e-10 70.1 198 27.8
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 9.0e-09 64.3 64 46.9
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 9.0e-09 64.3 40 70.0
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 9.0e-09 64.3 135 31.9
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 9.0e-09 64.3 135 31.9
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 1.5e-08 63.5 193 27.5
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-06 57.0 60 46.7
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 1.4e-06 57.0 32 81.2


User provided reference genes

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