Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H05049 Eucalyptus grandis HOM05D000744 ORTHO05D000332 8.7e-88 327.0 175 100.0
Eucgr.I00010 Eucalyptus grandis HOM05D000744 ORTHO05D000332 1.8e-32 143.3 169 55.0
Prupe.4G281700 Prunus persica HOM05D000744 ORTHO05D000332 2.3e-32 142.9 169 50.9
RcHm_v2.0_Chr2g0123581 Rosa chinensis HOM05D000744 ORTHO05D000332 2.3e-32 142.9 170 51.2
FvH4_1g25460 Fragaria vesca HOM05D000744 ORTHO05D000332 8.9e-32 141.0 170 50.6
FAN19G2143 Fragaria x ananassa HOM05D000744 ORTHO05D000332 8.9e-32 141.0 170 50.6
FAN26G2166 Fragaria x ananassa HOM05D000744 ORTHO05D000332 8.9e-32 141.0 170 50.6
FAN23G1538 Fragaria x ananassa HOM05D000744 ORTHO05D000332 4.4e-31 138.7 170 50.0
FAN28G1542 Fragaria x ananassa HOM05D000744 ORTHO05D000332 7.5e-31 137.9 170 50.0
Gorai.007G068300 Gossypium raimondii HOM05D000744 ORTHO05D000332 1.9e-29 133.3 170 50.0
Phvul.002G278000 Phaseolus vulgaris HOM05D000744 ORTHO05D000332 2.4e-29 132.9 175 48.0
GSVIVG01022425001 Vitis vinifera HOM05D000744 ORTHO05D000332 5.4e-29 131.7 170 50.6
Glyma.08G004900 Glycine max HOM05D000744 ORTHO05D000332 9.2e-29 131.0 175 48.0
Nn5g27539 Nelumbo nucifera HOM05D000744 ORTHO05D000332 1.6e-28 130.2 167 49.7
Lalb_Chr12g0202811 Lupinus albus HOM05D000744 ORTHO05D000332 2.0e-28 129.8 181 45.9
Thecc.01G237300 Theobroma cacao HOM05D000744 ORTHO05D000332 4.6e-28 128.6 176 48.9
arahy.Tifrunner.gnm1.ann1.D1A46Y Arachis hypogaea HOM05D000744 ORTHO05D000332 1.0e-27 127.5 179 46.4
CAN.G516.4 Capsicum annuum HOM05D000744 ORTHO05D000332 1.7e-27 126.7 174 47.7
Duzib187G0688 Durio zibethinus HOM05D000744 ORTHO05D000332 3.0e-27 125.9 175 47.4
Glyma.05G197500 Glycine max HOM05D000744 ORTHO05D000332 3.9e-27 125.6 176 46.0
Hma1.2p1_0057F.1_g032110 Hydrangea macrophylla HOM05D000744 ORTHO05D000332 5.0e-27 125.2 165 50.9
Gohir.D11G063200 Gossypium hirsutum HOM05D000744 ORTHO05D000332 6.6e-27 124.8 170 49.4
PSO782G5643 Papaver somniferum HOM05D000744 ORTHO05D000332 6.6e-27 124.8 170 47.6
TAR624G1191 Trochodendron aralioides HOM05D000744 ORTHO05D000332 8.6e-27 124.4 167 46.1
CSS0010560 Camellia sinensis var. sinensis HOM05D000744 ORTHO05D000332 1.1e-26 124.0 167 47.3
Solyc11g005460.2 Solanum lycopersicum HOM05D000744 ORTHO05D000332 1.9e-26 123.2 175 46.9
Sopen11g001470 Solanum pennellii HOM05D000744 ORTHO05D000332 2.5e-26 122.9 175 46.9
Actinidia19952 Actinidia chinensis HOM05D000744 ORTHO05D000332 3.3e-26 122.5 167 46.1
ECA248G2098 Erigeron canadensis HOM05D000744 ORTHO05D000332 3.3e-26 122.5 182 44.0
arahy.Tifrunner.gnm1.ann1.J6YJME Arachis hypogaea HOM05D000744 ORTHO05D000332 5.6e-26 121.7 181 44.2
Potri.T005401 Populus trichocarpa HOM05D000744 ORTHO05D000332 7.3e-26 121.3 181 44.8
Potri.T010700 Populus trichocarpa HOM05D000744 ORTHO05D000332 7.3e-26 121.3 181 44.8
Nitab4.5_0000701g0010 Nicotiana tabacum HOM05D000744 ORTHO05D000332 1.2e-25 120.6 169 46.7
Nitab4.5_0003764g0030 Nicotiana tabacum HOM05D000744 ORTHO05D000332 1.6e-25 120.2 174 46.0
Lj4g0009476 Lotus japonicus HOM05D000744 ORTHO05D000332 2.1e-25 119.8 187 42.2
Gohir.A11G059000 Gossypium hirsutum HOM05D000744 ORTHO05D000332 2.8e-25 119.4 170 46.5
THA.LOC104800333 Tarenaya hassleriana HOM05D000744 ORTHO05D000332 2.8e-25 119.4 212 41.0
Manes.13G078500 Manihot esculenta HOM05D000744 ORTHO05D000332 4.7e-25 118.6 184 46.2
Potri.004G138600 Populus trichocarpa HOM05D000744 ORTHO05D000332 4.7e-25 118.6 181 43.1
Cc00_g05570 Coffea canephora HOM05D000744 ORTHO05D000332 2.3e-24 116.3 172 45.3
Ciclev10027331m.g Citrus clementina HOM05D000744 ORTHO05D000332 4.0e-24 115.5 191 43.5
Glyma.04G205800 Glycine max HOM05D000744 ORTHO05D000332 5.2e-24 115.2 193 41.5
Aa31LG1G18240 Aethionema arabicum HOM05D000744 ORTHO05D000332 6.8e-24 114.8 218 40.8
MD15G1138500 Malus domestica HOM05D000744 ORTHO05D000332 8.9e-24 114.4 171 45.6
Glyma.06G159800 Glycine max HOM05D000744 ORTHO05D000332 1.2e-23 114.0 202 42.1
MBI03_g11327_MAGBIO Magnolia biondii HOM05D000744 ORTHO05D000332 1.2e-23 114.0 168 44.0
Peaxi162Scf00090g02114 Petunia axillaris HOM05D000744 ORTHO05D000332 1.5e-23 113.6 174 44.3
CiPaw.03G253300 Carya illinoinensis HOM05D000744 ORTHO05D000332 2.0e-23 113.2 199 41.7
DCAR_007809 Daucus carota HOM05D000744 ORTHO05D000332 2.0e-23 113.2 172 43.6
vmacro12734 Vaccinium macrocarpon HOM05D000744 ORTHO05D000332 2.6e-23 112.8 180 43.9
MSTRG.23503 Avicennia marina HOM05D000744 ORTHO05D000332 4.4e-23 112.1 200 42.5
Lalb_Chr07g0184041 Lupinus albus HOM05D000744 ORTHO05D000332 5.8e-23 111.7 184 41.3
Oeu050086.1 Olea europaea HOM05D000744 ORTHO05D000332 1.3e-22 110.5 202 40.6
Rhsim10G0152800 Rhododendron simsii HOM05D000744 ORTHO05D000332 1.3e-22 110.5 169 44.4
Sabra19G0003000 Salix brachista HOM05D000744 ORTHO05D000332 1.3e-22 110.5 181 44.2
TPR.G12966 Trifolium pratense HOM05D000744 ORTHO05D000332 3.7e-22 109.0 185 41.6
Psat7g042080 Pisum sativum HOM05D000744 ORTHO05D000332 8.3e-22 107.8 180 40.6
Haze_25421 Corylus avellana HOM05D000744 ORTHO05D000332 1.1e-21 107.5 202 38.1
arahy.Tifrunner.gnm1.ann1.5BR908 Arachis hypogaea HOM05D000744 ORTHO05D000332 1.9e-21 106.7 189 40.2
arahy.Tifrunner.gnm1.ann1.6U5Y09 Arachis hypogaea HOM05D000744 ORTHO05D000332 1.9e-21 106.7 189 40.2
MBI06_g20963_MAGBIO Magnolia biondii HOM05D000744 ORTHO05D000332 2.4e-21 106.3 162 43.8
QL10p038923 Quercus lobata HOM05D000744 ORTHO05D000332 3.2e-21 105.9 202 38.6
PSO170G6773 Papaver somniferum HOM05D000744 ORTHO05D000332 4.1e-21 105.5 170 42.9
Cfa002241 Carpinus fangiana HOM05D000744 ORTHO05D000332 5.4e-21 105.1 202 38.1
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 9.2e-21 104.4 194 39.2
HPP92_002042 Vanilla planifolia HOM05D000744 ORTHO05D000332 2.1e-20 103.2 171 39.8
unitig_899.g14498 Utricularia gibba HOM05D000744 ORTHO05D000332 3.5e-20 102.4 198 38.9
Lalb_Chr08g0237771 Lupinus albus HOM05D000744 ORTHO05D000332 4.6e-20 102.1 196 39.8
SGA_v2.0_scaffold211G42141 Striga asiatica HOM05D000744 ORTHO05D000332 4.6e-20 102.1 155 44.5
Aqoxy6G00062 Aquilegia oxysepala HOM05D000744 ORTHO05D000332 6.0e-20 101.7 166 42.8
Sed0000983 Sechium edule HOM05D000744 ORTHO05D000332 6.0e-20 101.7 179 41.3
Phvul.009G157500 Phaseolus vulgaris HOM05D000744 ORTHO05D000332 7.8e-20 101.3 204 38.7
Sabra19G0009200 Salix brachista HOM05D000744 ORTHO05D000332 1.3e-19 100.5 192 40.1
CsaV3_4G027580 Cucumis sativus L. HOM05D000744 ORTHO05D000332 2.3e-19 99.8 183 41.5
HanXRQChr01g0017131 Helianthus annuus HOM05D000744 ORTHO05D000332 2.3e-19 99.8 177 41.8
Cpa.g.sc138.17 Carica papaya HOM05D000744 ORTHO05D000332 3.0e-19 99.4 165 43.6
TWI79G1714 Tripterygium wilfordii HOM05D000744 ORTHO05D000332 3.0e-19 99.4 180 40.6
ClCG04G002940 Citrullus lanatus HOM05D000744 ORTHO05D000332 3.9e-19 99.0 183 41.0
MELO3C003249.2 Cucumis melo HOM05D000744 ORTHO05D000332 3.9e-19 99.0 183 41.5
TAR381G1086 Trochodendron aralioides HOM05D000744 ORTHO05D000332 3.9e-19 99.0 167 41.9
Psat5g057600 Pisum sativum HOM05D000744 ORTHO05D000332 5.1e-19 98.6 250 34.8
PGR102G0334 Punica granatum HOM05D000744 ORTHO05D000332 6.6e-19 98.2 139 48.2
Migut.H00793 Erythranthe guttata HOM05D000744 ORTHO05D000332 1.5e-18 97.1 222 34.7
CANSAT54G1235 Cannabis sativa HOM05D000744 ORTHO05D000332 1.9e-18 96.7 207 36.7
Lsat_1_v5_gn_1_77960 Lactuca sativa HOM05D000744 ORTHO05D000332 1.9e-18 96.7 176 40.3
VMungo1309G2780 Vigna mungo HOM05D000744 ORTHO05D000332 1.9e-18 96.7 202 38.6
Eucgr.L00736 Eucalyptus grandis HOM05D000744 ORTHO05D000332 3.3e-18 95.9 86 59.3
Ca_17593_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 9.5e-18 94.4 185 38.9
Medtr8g095280 Medicago truncatula HOM05D000744 ORTHO05D000332 1.2e-17 94.0 180 38.9
Hund06896 Selenicereus undatus HOM05D000744 ORTHO05D000332 2.1e-17 93.2 213 37.1
Duzib147G1701 Durio zibethinus HOM05D000744 ORTHO05D000332 4.7e-17 92.0 139 41.7
EL10Ac4g08977 Beta vulgaris HOM05D000744 ORTHO05D000332 2.3e-16 89.7 224 36.6
BcaB02g09742 Brassica carinata HOM05D000744 ORTHO05D000332 2.3e-16 89.7 210 38.1
CDE04G3139 Ceratophyllum demersum HOM05D000744 ORTHO05D000332 3.1e-16 89.4 163 39.3
Zm00001eb260360 Zea mays HOM05D000744 ORTHO05D000332 3.1e-16 89.4 174 42.5
Sc20g0000740 Simmondsia chinensis HOM05D000744 ORTHO05D000332 6.8e-16 88.2 211 34.6
TWI75G1559 Tripterygium wilfordii HOM05D000744 ORTHO05D000332 1.2e-15 87.4 179 40.2
THA.LOC104818406 Tarenaya hassleriana HOM05D000744 ORTHO05D000332 2.6e-15 86.3 220 35.5
Os08g0109000 Oryza sativa ssp. japonica HOM05D000744 ORTHO05D000332 7.6e-15 84.7 176 41.5
BcaC01g02618 Brassica carinata HOM05D000744 ORTHO05D000332 1.7e-14 83.6 209 36.8
BolC3t18534H Brassica oleracea HOM05D000744 ORTHO05D000332 1.7e-14 83.6 209 36.8
unitig_736.g22551 Utricularia gibba HOM05D000744 ORTHO05D000332 1.7e-14 83.6 196 32.7
AUR62004812 Chenopodium quinoa HOM05D000744 ORTHO05D000332 2.2e-14 83.2 229 34.9
AUR62036031 Chenopodium quinoa HOM05D000744 ORTHO05D000332 2.2e-14 83.2 229 34.5
Medtr3g097280 Medicago truncatula HOM05D000744 ORTHO05D000332 2.2e-14 83.2 258 31.4
A06p30260 Brassica napus HOM05D000744 ORTHO05D000332 4.9e-14 82.0 209 36.8
BraA06t25975Z Brassica rapa HOM05D000744 ORTHO05D000332 4.9e-14 82.0 209 36.8
ATR1136G162 Amborella trichopoda HOM05D000744 ORTHO05D000332 1.1e-13 80.9 215 34.4
C03p62800 Brassica napus HOM05D000744 ORTHO05D000332 7.1e-13 78.2 209 35.9
Ca_17029_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 9.2e-13 77.8 133 42.9
Ca_29645_v3 Cicer arietinum L. HOM05D000744 ORTHO05D000332 9.2e-13 77.8 133 42.9
BcaC03g18216 Brassica carinata HOM05D000744 ORTHO05D000332 2.1e-12 76.6 192 33.3
Psat4g127160 Pisum sativum HOM05D000744 ORTHO05D000332 3.5e-12 75.9 120 40.8
Ah.06g191790 Amaranthus hybridus HOM05D000744 ORTHO05D000332 7.8e-12 74.7 185 35.7
Zm00001eb174210 Zea mays HOM05D000744 ORTHO05D000332 1.0e-11 74.3 142 42.3
PSO017G5441 Papaver somniferum HOM05D000744 ORTHO05D000332 1.3e-11 73.9 181 32.6
Lj2A617T14 Lonicera japonica HOM05D000744 ORTHO05D000332 2.3e-11 73.2 198 33.3
Carub.0008s2440 Capsella rubella HOM05D000744 ORTHO05D000332 3.0e-11 72.8 225 32.9
Sp2g26730 Schrenkiella parvula HOM05D000744 ORTHO05D000332 8.6e-11 71.2 214 32.2
Lj1g0021643 Lotus japonicus HOM05D000744 ORTHO05D000332 4.3e-10 68.9 208 32.7
AT5G63640 Arabidopsis thaliana HOM05D000744 ORTHO05D000332 1.2e-09 67.4 214 34.1
A02p42910 Brassica napus HOM05D000744 ORTHO05D000332 1.6e-09 67.0 188 33.5
Oeu017624.2 Olea europaea HOM05D000744 ORTHO05D000332 2.8e-09 66.2 152 34.2
C02p62850 Brassica napus HOM05D000744 ORTHO05D000332 6.2e-09 65.1 199 29.6
TPR.G28691 Trifolium pratense HOM05D000744 ORTHO05D000332 8.1e-09 64.7 256 28.5
CARHR277520 Cardamine hirsuta HOM05D000744 ORTHO05D000332 5.8e-07 58.5 215 32.1
Thhalv10004212m.g Eutrema salsugineum HOM05D000744 ORTHO05D000332 7.6e-07 58.2 213 28.6
Lj2A423G53 Lonicera japonica HOM05D000744 ORTHO05D000332 9.9e-07 57.8 195 31.3
Dinv16808 Davidia involucrata HOM05D000744 ORTHO05D000332 1.7e-06 57.0 67 47.8
AL8G40760 Arabidopsis lyrata HOM05D000744 ORTHO05D000332 4.9e-06 55.5 216 28.2


User provided reference genes

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