Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 5.5e-220 767.3 382 100.0
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 2.9e-128 462.6 389 60.2
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 3.6e-118 429.1 356 60.4
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 1.0e-117 427.6 387 58.9
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 2.8e-115 419.5 333 61.0
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.4e-114 417.2 298 67.1
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 7.0e-114 414.8 296 65.2
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 1.5e-113 413.7 344 61.9
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 2.2e-112 409.8 297 66.7
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 2.9e-112 409.5 382 56.3
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 6.5e-112 408.3 352 61.1
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 8.5e-112 407.9 392 55.4
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.1e-111 407.5 297 66.3
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 1.1e-111 407.5 303 65.0
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.9e-111 406.8 297 66.7
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 3.2e-111 406.0 291 66.3
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 9.4e-111 404.4 382 56.3
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.2e-110 404.1 296 65.9
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 3.6e-110 402.5 306 61.4
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.0e-109 401.0 298 68.1
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.4e-109 400.6 340 59.1
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 3.0e-109 399.4 385 54.8
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 3.3e-108 396.0 384 55.2
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.3e-107 394.0 370 56.8
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 8.2e-107 391.3 308 63.0
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 1.8e-106 390.2 383 55.4
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.8e-106 390.2 356 57.6
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 7.0e-106 388.3 298 63.8
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 9.1e-106 387.9 385 53.5
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 9.1e-106 387.9 372 55.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 9.1e-106 387.9 304 62.5
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 9.1e-106 387.9 399 51.4
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.2e-105 387.5 373 54.2
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 1.6e-105 387.1 301 63.8
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 3.5e-105 386.0 336 57.1
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 4.5e-105 385.6 299 62.9
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.0e-104 384.4 282 62.4
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 1.7e-104 383.6 387 54.3
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 2.9e-104 382.9 305 61.0
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 3.8e-104 382.5 299 62.2
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.5e-103 380.6 299 58.5
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 4.2e-103 379.0 283 65.4
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 5.5e-103 378.6 283 63.6
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 2.1e-102 376.7 302 62.9
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.6e-102 375.9 333 55.0
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.0e-101 374.4 298 59.1
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.0e-101 374.4 330 55.2
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 2.3e-101 373.2 288 62.2
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.2e-100 370.9 285 61.8
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 3.4e-100 369.4 299 61.5
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 5.7e-100 368.6 377 52.0
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 3.7e-99 365.9 350 54.0
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 6.3e-99 365.2 385 51.7
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 6.3e-99 365.2 322 54.7
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 8.3e-99 364.8 337 53.1
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 4.1e-98 362.5 349 53.3
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 4.1e-98 362.5 386 51.0
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 3.5e-97 359.4 384 52.3
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.0e-96 357.8 293 58.4
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 5.0e-96 355.5 289 61.6
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 5.0e-96 355.5 304 57.9
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 6.5e-96 355.1 293 58.7
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 1.1e-95 354.4 294 57.8
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 2.5e-95 353.2 373 50.1
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 2.5e-95 353.2 386 50.5
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 2.5e-95 353.2 386 49.2
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 7.2e-95 351.7 331 53.8
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 2.7e-94 349.7 304 54.6
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 3.6e-94 349.4 385 49.4
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 3.6e-94 349.4 330 55.8
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 9.8e-92 341.3 328 53.0
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 6.3e-91 338.6 361 50.4
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 5.4e-90 335.5 390 49.0
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 3.5e-89 332.8 389 49.4
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.7e-88 330.5 338 52.1
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 5.0e-88 328.9 366 48.1
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 5.0e-88 328.9 364 51.4
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 8.6e-88 328.2 369 48.0
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.5e-87 327.4 375 49.1
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.9e-87 327.0 302 57.0
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 5.6e-87 325.5 290 57.9
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 9.5e-87 324.7 367 47.7
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.6e-86 323.9 374 47.6
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 1.3e-83 314.3 214 66.4
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 4.6e-81 305.8 275 56.0
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.6e-81 305.8 249 61.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 7.8e-81 305.1 236 58.9
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 2.9e-75 286.6 332 44.3
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 5.4e-74 282.3 279 52.7
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 2.7e-73 280.0 290 50.3
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.3e-67 261.2 379 40.9
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 1.7e-56 224.2 353 36.5
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 2.3e-56 223.8 116 98.3
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 2.5e-55 220.3 319 39.8
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 3.6e-54 216.5 163 63.8
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 3.4e-52 209.9 303 39.9
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.3e-48 197.2 158 59.5
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.3e-46 191.4 366 35.5
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.4e-42 177.9 176 52.3
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 6.6e-40 169.1 292 34.2
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 8.7e-40 168.7 297 35.7
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 4.0e-37 159.8 225 46.2
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.2e-34 149.8 128 57.8
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 8.1e-30 135.6 83 75.9
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 3.4e-28 130.2 100 59.0
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.1e-22 110.9 127 47.2
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.8e-22 109.8 78 62.8
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 5.3e-21 106.3 287 29.3
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 8.4e-19 99.0 299 29.8


User provided reference genes

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