Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.7e-93 345.9 167 100.0
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.4e-82 309.7 237 69.2
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.3e-72 276.6 202 68.3
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 6.4e-72 274.2 230 62.2
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 9.3e-71 270.4 237 60.3
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.0e-69 266.9 237 58.6
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 3.9e-69 265.0 191 69.6
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 3.9e-69 265.0 237 57.4
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 6.6e-69 264.2 215 60.5
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 6.6e-69 264.2 238 58.0
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 1.9e-68 262.7 225 60.4
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 9.6e-68 260.4 240 55.0
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 1.3e-67 260.0 240 55.4
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 2.1e-67 259.2 238 57.1
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 3.6e-67 258.5 238 57.1
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 6.2e-67 257.7 238 57.1
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 6.2e-67 257.7 240 56.7
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 8.1e-67 257.3 216 61.1
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.1e-66 256.9 238 58.0
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 1.1e-66 256.9 240 54.2
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.1e-66 256.9 237 57.4
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 1.8e-66 256.1 240 54.6
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 2.4e-66 255.8 239 54.4
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 2.4e-66 255.8 237 58.2
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 3.1e-66 255.4 239 56.1
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.1e-66 255.4 239 56.1
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.0e-66 255.0 239 55.6
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 4.0e-66 255.0 239 55.2
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.2e-65 253.4 240 56.2
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.2e-65 253.4 240 56.2
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 1.2e-65 253.4 239 55.2
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.2e-65 253.4 237 57.8
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.2e-65 253.4 237 57.8
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.5e-65 253.1 237 55.7
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 2.0e-65 252.7 240 54.2
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 2.0e-65 252.7 240 53.3
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 2.0e-65 252.7 240 53.3
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 2.0e-65 252.7 238 54.2
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 2.6e-65 252.3 225 58.2
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 3.4e-65 251.9 240 55.4
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 4.5e-65 251.5 241 53.1
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 5.8e-65 251.1 239 53.6
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 7.6e-65 250.8 240 53.3
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.3e-64 250.0 258 52.7
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 2.2e-64 249.2 240 52.5
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 2.9e-64 248.8 241 54.4
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 3.8e-64 248.4 239 54.4
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 6.4e-64 247.7 240 52.5
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 6.4e-64 247.7 239 54.0
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 1.1e-63 246.9 234 55.6
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 1.9e-63 246.1 240 56.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 3.2e-63 245.4 248 52.4
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 4.2e-63 245.0 239 53.6
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.6e-62 243.0 240 52.9
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 2.7e-62 242.3 240 53.3
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 2.7e-62 242.3 243 53.1
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 3.5e-62 241.9 240 53.3
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 3.5e-62 241.9 239 52.3
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 7.9e-62 240.7 139 79.1
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 5.1e-61 238.0 226 56.2
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 5.1e-61 238.0 158 71.5
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 5.1e-61 238.0 241 53.1
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 6.7e-61 237.7 141 79.4
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 4.3e-60 235.0 197 58.9
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.3e-60 235.0 252 50.8
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.3e-59 233.4 141 80.1
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.6e-59 233.0 139 78.4
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.1e-59 232.6 215 58.6
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.8e-59 231.5 215 58.1
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.4e-58 229.9 240 52.5
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 3.1e-58 228.8 291 45.7
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 3.1e-58 228.8 259 49.0
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 5.3e-58 228.0 214 52.8
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 2.0e-57 226.1 208 53.8
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 9.9e-57 223.8 145 74.5
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.3e-56 223.4 240 48.3
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 3.2e-55 218.8 239 48.5
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 9.3e-55 217.2 184 59.2
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 2.7e-54 215.7 203 56.2
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 3.5e-54 215.3 235 47.7
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 1.8e-53 213.0 239 47.3
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.9e-53 211.8 240 47.1
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 3.9e-53 211.8 235 47.7
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.5e-52 209.9 208 52.4
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 1.5e-52 209.9 229 49.8
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 3.7e-51 205.3 134 72.4
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.4e-50 203.4 147 65.3
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 4.0e-50 201.8 234 47.0
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 5.3e-50 201.4 121 76.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 3.8e-48 195.3 224 43.3
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 4.2e-47 191.8 108 80.6
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.6e-46 188.3 112 78.6
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 6.7e-45 184.5 295 42.0
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 6.9e-42 174.5 111 72.1
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 9.0e-42 174.1 128 65.6
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 1.5e-41 173.3 123 66.7
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 3.6e-38 162.2 139 59.0
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 6.7e-37 157.9 126 61.1
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 3.3e-36 155.6 93 75.3
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 6.3e-35 151.4 92 72.8
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 8.5e-32 141.0 133 55.6
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 1.1e-31 140.6 218 36.7
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.2e-31 139.0 101 67.3
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 6.1e-30 134.8 174 44.3
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-29 133.3 104 63.5
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 6.7e-29 131.3 193 36.3
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 1.3e-27 127.1 75 77.3
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 4.5e-25 118.6 265 35.1
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 6.5e-24 114.8 201 30.8
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 3.6e-22 109.0 115 43.5
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 2.3e-21 106.3 65 73.8
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 3.9e-21 105.5 62 77.4
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 9.7e-20 100.9 75 65.3
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 4.4e-12 75.5 141 32.6
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 5.3e-10 68.6 112 33.0
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 5.3e-10 68.6 135 34.8
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 2.7e-09 66.2 48 70.8
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 1.3e-08 63.9 46 69.6
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.7e-08 63.5 46 67.4
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.7e-08 63.5 86 45.3
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 2.9e-08 62.8 46 63.0
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 6.5e-08 61.6 45 66.7
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 8.5e-08 61.2 46 63.0


User provided reference genes

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