Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04911 Eucalyptus grandis HOM05D009248 ORTHO05D011411 4.4e-164 581.3 298 100.0
Eucgr.H04906 Eucalyptus grandis HOM05D009248 ORTHO05D011411 2.6e-39 166.8 88 93.2
SGA_v2.0_scaffold8G04627 Striga asiatica HOM05D009248 ORTHO05D011411 7.5e-39 165.2 138 63.0
Zm00001eb376140 Zea mays HOM05D009248 ORTHO05D011411 3.3e-34 149.8 137 65.0
Os06g0131001 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 4.3e-34 149.4 139 63.3
Zm00001eb271250 Zea mays HOM05D009248 ORTHO05D011411 3.6e-33 146.4 147 59.9
Cpa.g.sc55.60 Carica papaya HOM05D009248 ORTHO05D011411 6.8e-32 142.1 149 53.0
Os06g0160000 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 6.8e-32 142.1 140 61.4
Zm00001eb181730 Zea mays HOM05D009248 ORTHO05D011411 2.0e-31 140.6 118 66.1
Os11g0155950 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 5.7e-31 139.0 139 59.0
Atru.chr13.1919 Acer truncatum HOM05D009248 ORTHO05D011411 4.9e-30 136.0 143 53.1
FAN11G2848 Fragaria x ananassa HOM05D009248 ORTHO05D011411 4.9e-30 136.0 104 67.3
Lsat_1_v5_gn_6_48640 Lactuca sativa HOM05D002542 ORTHO05D005078 6.2e-25 119.0 135 52.6
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 2.6e-23 113.6 139 47.5
Dinv05186 Davidia involucrata HOM05D002878 ORTHO05D003649 9.8e-23 111.7 109 59.6
arahy.Tifrunner.gnm1.ann1.RU7JNP Arachis hypogaea HOM05D009248 ORTHO05D011411 1.3e-22 111.3 114 53.5
HPP92_006102 Vanilla planifolia HOM05D009248 ORTHO05D011411 2.9e-22 110.2 135 50.4
Dinv36294 Davidia involucrata HOM05D009248 ORTHO05D011411 3.7e-22 109.8 100 60.0
Ciclev10030158m.g Citrus clementina HOM05D009248 ORTHO05D011411 9.2e-21 105.1 110 50.9
Ciclev10003105m.g Citrus clementina HOM05D009248 ORTHO05D011411 2.0e-20 104.0 108 50.9
Hma1.2p1_0019F.1_g013770 Hydrangea macrophylla HOM05D009248 ORTHO05D011411 3.0e-19 100.1 136 43.4
SGA_v2.0_scaffold326G48753 Striga asiatica HOM05D009248 ORTHO05D011411 3.0e-19 100.1 92 55.4
SEGI_24703 Sequoiadendron giganteum HOM05D009248 ORTHO05D011411 9.8e-15 85.1 120 46.7
DCAR_004036 Daucus carota HOM05D009248 ORTHO05D011411 1.7e-14 84.3 107 46.7
Actinidia21566 Actinidia chinensis HOM05D009248 ORTHO05D011411 4.9e-14 82.8 103 52.4
Thecc.05G224900 Theobroma cacao HOM05D009248 ORTHO05D011411 1.1e-13 81.6 86 46.5
Os02g0457325 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 2.7e-12 77.0 57 64.9
Os02g0457175 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 3.5e-12 76.6 61 63.9
Hma1.2p1_0237F.1_g099550 Hydrangea macrophylla HOM05D009248 ORTHO05D011411 1.8e-08 64.3 115 40.0
EL10Ac4g08271 Beta vulgaris HOM05D000288 ORTHO05D000173 3.1e-08 63.5 83 36.1
Os03g0390633 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 4.0e-08 63.2 66 53.0
HPP92_027065 Vanilla planifolia HOM05D009248 ORTHO05D011411 7.6e-07 58.9 62 53.2
Os04g0450825 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 9.9e-07 58.5 91 41.8
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 4.9e-06 56.2 90 42.2
Oeu022030.2 Olea europaea HOM05D009248 ORTHO05D011411 6.4e-06 55.8 56 50.0
Oeu014065.1 Olea europaea HOM05D009248 ORTHO05D011411 8.4e-06 55.5 57 52.6


User provided reference genes

Program Settings