Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 1.2e-122 443.4 241 100.0
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 1.2e-111 406.8 241 90.9
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 2.9e-110 402.1 241 88.4
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 1.5e-109 399.8 241 88.0
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 7.3e-109 397.5 241 87.1
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 9.5e-109 397.1 241 88.8
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 4.7e-108 394.8 242 88.8
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 6.1e-108 394.4 243 86.8
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 3.0e-107 392.1 242 88.8
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 6.8e-107 391.0 241 85.1
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 8.9e-107 390.6 241 85.5
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 8.9e-107 390.6 241 86.7
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 1.5e-106 389.8 241 86.7
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 5.7e-106 387.9 242 87.2
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 1.3e-105 386.7 241 85.1
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.7e-105 386.3 242 87.6
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 2.2e-105 386.0 241 84.6
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 2.9e-105 385.6 242 86.0
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 3.7e-105 385.2 241 84.2
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 4.9e-105 384.8 241 83.8
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 1.1e-104 383.6 241 84.2
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 2.4e-104 382.5 241 83.8
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 3.2e-104 382.1 241 83.4
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 1.6e-103 379.8 241 82.2
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 2.7e-103 379.0 244 85.2
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 2.7e-103 379.0 240 83.3
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 5.9e-103 377.9 241 83.0
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 7.8e-103 377.5 241 83.0
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.3e-102 376.7 242 82.2
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.7e-102 376.3 282 75.2
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 3.0e-102 375.6 241 81.3
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 8.6e-102 374.0 241 83.8
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 1.1e-101 373.6 241 82.6
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.1e-101 373.6 242 82.2
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.9e-101 372.9 241 83.4
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 3.3e-101 372.1 241 83.8
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 2.8e-100 369.0 242 81.8
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 6.2e-100 367.9 242 82.6
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 8.0e-100 367.5 242 82.2
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 1.4e-99 366.7 234 83.3
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 2.3e-99 365.9 220 88.2
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 5.2e-99 364.8 241 80.5
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 5.2e-99 364.8 242 81.4
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 1.5e-98 363.2 242 79.3
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 2.6e-98 362.5 241 78.8
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 4.4e-98 361.7 243 79.8
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 4.4e-98 361.7 241 80.1
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 9.8e-98 360.5 244 80.3
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 1.3e-97 360.1 244 79.5
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.3e-97 360.1 241 83.4
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 2.2e-97 359.4 242 78.1
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 3.7e-97 358.6 239 81.6
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 4.9e-97 358.2 241 79.3
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.1e-96 357.1 241 79.3
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 1.4e-96 356.7 242 78.1
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 1.9e-96 356.3 237 79.7
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 5.4e-96 354.8 242 78.1
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 9.2e-96 354.0 242 79.3
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 1.6e-95 353.2 244 78.7
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 3.5e-95 352.1 241 76.8
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 4.6e-95 351.7 242 79.3
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 4.6e-95 351.7 240 79.6
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 6.0e-95 351.3 221 83.7
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 1.3e-94 350.1 238 79.0
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 1.7e-94 349.7 242 76.4
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 5.0e-94 348.2 228 80.7
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 8.6e-94 347.4 245 76.7
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 1.9e-93 346.3 241 76.3
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 5.6e-93 344.7 233 79.0
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 1.6e-92 343.2 222 83.3
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.8e-91 339.7 197 92.4
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 2.3e-91 339.3 241 74.3
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 2.3e-91 339.3 243 76.5
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 4.0e-91 338.6 245 75.9
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 1.2e-90 337.0 242 75.2
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.5e-90 336.7 196 91.8
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 4.4e-90 335.1 196 90.8
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 9.8e-90 334.0 243 75.3
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 1.3e-89 333.6 241 72.2
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.3e-89 333.6 241 73.9
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 1.7e-89 333.2 241 72.2
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 2.2e-89 332.8 241 71.4
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 2.2e-89 332.8 241 72.6
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 3.7e-89 332.0 241 72.2
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 1.4e-88 330.1 223 77.1
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 1.4e-88 330.1 241 71.4
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 1.9e-88 329.7 241 71.4
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 1.9e-88 329.7 243 76.5
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.9e-88 329.7 241 71.4
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 2.4e-88 329.3 241 71.4
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 2.4e-88 329.3 241 71.8
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 2.4e-88 329.3 241 71.8
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 2.4e-88 329.3 243 74.1
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 3.2e-88 328.9 243 73.7
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 5.4e-88 328.2 241 71.0
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 7.1e-88 327.8 281 67.6
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 7.1e-88 327.8 246 74.4
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.6e-87 326.6 243 72.4
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 2.1e-87 326.2 258 71.7
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 2.1e-87 326.2 196 88.8
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 2.7e-87 325.9 290 63.8
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 2.7e-87 325.9 244 72.5
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 3.5e-87 325.5 242 71.1
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 3.5e-87 325.5 242 71.1
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 1.0e-86 323.9 241 69.7
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 1.3e-86 323.6 242 70.7
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 1.7e-86 323.2 226 75.7
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 3.9e-86 322.0 196 86.2
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 5.1e-86 321.6 244 70.5
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 1.1e-85 320.5 196 87.2
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.1e-85 320.5 258 70.9
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 1.9e-85 319.7 244 70.5
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 1.9e-85 319.7 243 72.4
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 2.5e-85 319.3 278 65.8
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 2.5e-85 319.3 246 69.1
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 3.3e-85 318.9 229 76.0
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 2.1e-84 316.2 198 83.3
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 6.2e-84 314.7 199 83.9
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 8.1e-84 314.3 199 83.4
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 1.4e-83 313.5 199 82.9
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 2.3e-83 312.8 199 83.4
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 1.5e-82 310.1 196 83.7
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 4.4e-82 308.5 276 65.2
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 1.7e-81 306.6 244 68.0
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 2.2e-81 306.2 244 67.6
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 7.1e-80 301.2 232 72.0
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.6e-76 290.0 179 85.5
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 1.7e-73 280.0 196 73.5
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 1.7e-73 280.0 242 65.3
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 5.4e-72 275.0 220 71.4
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 1.2e-71 273.9 175 81.7
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 1.1e-64 250.8 188 70.7
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.4e-64 249.6 196 72.4
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 4.8e-60 235.3 223 60.1
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 2.2e-57 226.5 135 85.9
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 1.4e-56 223.8 155 76.8
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 2.2e-49 199.9 155 67.1
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 9.6e-45 184.5 149 69.1
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 2.4e-43 179.9 130 73.1
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 1.7e-41 173.7 112 81.2
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 2.5e-40 169.9 167 60.5
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 3.0e-38 162.9 232 49.1
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 1.0e-33 147.9 223 46.6
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 5.0e-33 145.6 219 40.2
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 3.3e-29 132.9 206 38.8
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 3.3e-29 132.9 236 43.2
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 1.8e-27 127.1 209 37.8
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 5.9e-26 122.1 99 69.7
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 2.6e-21 106.7 213 33.8
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 4.4e-21 105.9 77 75.3
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 5.7e-21 105.5 178 46.1
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 7.4e-21 105.1 215 34.4
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 2.2e-17 93.6 63 79.4
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 4.4e-13 79.3 65 63.1
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 7.5e-13 78.6 64 68.8
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 1.7e-09 67.4 215 28.8
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 6.1e-07 58.9 41 78.0
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 1.0e-06 58.2 40 80.0
C06p01940 Brassica napus HOM05D004411 ORTHO05D032662 5.2e-06 55.8 92 43.5


User provided reference genes

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