Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 3.1e-121 438.7 263 100.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 2.1e-93 346.3 196 84.2
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.4e-92 343.6 196 82.7
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 6.7e-92 341.3 196 82.1
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 1.5e-91 340.1 196 82.7
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 2.0e-91 339.7 196 82.1
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 2.0e-91 339.7 196 82.1
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 5.7e-91 338.2 195 82.6
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 5.7e-91 338.2 196 81.1
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 7.4e-91 337.8 196 82.7
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 9.7e-91 337.4 196 82.7
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 2.2e-90 336.3 187 86.6
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 3.7e-90 335.5 196 80.1
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 3.7e-90 335.5 196 80.1
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 8.2e-90 334.3 198 78.8
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 8.2e-90 334.3 196 81.1
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.4e-89 333.6 196 79.6
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.8e-89 333.2 195 80.0
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.8e-89 333.2 195 80.0
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.8e-89 333.2 196 80.1
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.4e-89 332.8 196 78.6
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 3.1e-89 332.4 196 81.6
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 3.1e-89 332.4 195 80.0
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 3.1e-89 332.4 196 79.6
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 4.1e-89 332.0 196 81.6
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 4.1e-89 332.0 198 79.3
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 7.0e-89 331.3 195 79.0
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 9.1e-89 330.9 196 80.6
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 9.1e-89 330.9 196 80.1
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.2e-88 330.5 196 79.1
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.6e-88 330.1 198 79.3
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 2.0e-88 329.7 196 78.6
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 2.6e-88 329.3 196 80.1
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 2.6e-88 329.3 195 78.5
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 5.9e-88 328.2 196 78.1
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 1.0e-87 327.4 196 78.1
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 1.0e-87 327.4 196 77.6
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.0e-87 327.4 196 80.1
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.3e-87 327.0 196 78.6
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 5.0e-87 325.1 196 80.1
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.5e-87 324.7 196 79.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 6.5e-87 324.7 195 79.0
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 6.5e-87 324.7 198 78.3
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.1e-86 323.9 196 77.6
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.1e-86 323.9 197 79.7
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.5e-86 323.6 196 77.6
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.2e-86 322.4 196 78.6
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 9.4e-86 320.9 196 78.6
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.1e-85 319.7 196 78.1
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.7e-85 319.3 196 77.6
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.7e-85 319.3 199 76.9
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 3.6e-85 318.9 198 76.8
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 3.6e-85 318.9 187 80.7
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 8.0e-85 317.8 193 78.8
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.0e-84 317.4 196 77.0
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.3e-84 316.2 196 76.0
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 3.0e-84 315.8 198 74.2
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 4.0e-84 315.5 198 76.3
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 5.2e-84 315.1 196 76.5
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 2.6e-83 312.8 196 75.5
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.6e-83 312.8 198 74.2
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 3.3e-83 312.4 198 76.3
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 3.3e-83 312.4 198 74.2
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 4.4e-83 312.0 198 76.3
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.3e-82 310.5 188 78.7
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 1.7e-82 310.1 196 74.5
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.7e-82 310.1 196 75.0
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 8.2e-82 307.8 197 73.6
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 8.2e-82 307.8 197 75.1
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 3.1e-81 305.8 198 76.3
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.2e-80 303.9 199 73.4
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.2e-80 303.9 197 74.6
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.2e-80 303.9 197 74.6
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.2e-80 303.9 197 74.6
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 1.6e-80 303.5 199 74.9
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 3.5e-80 302.4 196 74.5
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 5.9e-80 301.6 196 72.4
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 1.0e-79 300.8 196 75.5
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 1.3e-79 300.4 197 73.6
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.7e-79 300.1 197 73.6
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 2.2e-79 299.7 197 73.6
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 3.8e-79 298.9 200 73.5
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 3.8e-79 298.9 167 84.4
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 6.5e-79 298.1 193 72.5
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.8e-76 290.0 196 73.0
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 8.8e-76 287.7 194 70.6
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 3.4e-75 285.8 195 68.7
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 9.8e-75 284.3 167 82.6
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 9.8e-75 284.3 193 70.5
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 4.8e-74 282.0 191 69.6
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.7e-61 238.8 146 77.4
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.4e-60 237.3 195 54.4
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 2.6e-59 233.0 128 88.3
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 4.1e-57 225.7 128 83.6
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.5e-51 204.9 220 50.5
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.7e-50 203.8 129 78.3
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 7.0e-49 198.4 161 62.1
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 4.6e-48 195.7 188 51.6
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.8e-48 194.9 220 49.5
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 4.0e-44 182.6 143 58.7
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.4e-43 179.5 131 65.6
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 9.9e-43 177.9 185 48.6
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.2e-40 171.0 227 44.5
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 4.3e-38 162.5 95 81.1
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.4e-36 156.8 92 83.7
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 2.0e-35 153.7 117 62.4
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.2e-33 144.8 114 63.2
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.3e-31 140.2 98 67.3
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.9e-31 139.4 122 58.2
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 5.6e-30 135.6 127 59.8
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 9.6e-30 134.8 182 41.2
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 9.6e-30 134.8 145 44.1
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 6.2e-29 132.1 94 70.2
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 8.1e-29 131.7 177 42.4
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 5.3e-20 102.4 71 63.4
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.9e-17 94.0 54 75.9
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.1e-14 84.7 51 76.5
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 3.7e-13 79.7 52 65.4
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 6.9e-12 75.5 64 57.8
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.3e-10 71.2 56 55.4
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.2e-10 70.5 61 54.1
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.4e-09 67.8 52 57.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 5.5e-09 65.9 68 54.4
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 2.1e-08 63.9 43 74.4


User provided reference genes

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