Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 0.0e+00 1209.9 656 100.0
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 6.3e-248 860.9 663 69.7
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 2.2e-245 852.4 661 67.9
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 2.7e-243 845.5 661 67.6
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 2.3e-242 842.4 671 66.6
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 2.9e-237 825.5 656 65.7
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 1.5e-236 823.2 662 65.6
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.9e-236 822.8 651 66.7
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 4.7e-235 818.1 656 65.9
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.0e-234 817.0 647 67.7
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 1.4e-234 816.6 643 66.3
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 6.8e-234 814.3 652 66.7
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 3.4e-233 812.0 678 66.2
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 3.4e-233 812.0 666 65.3
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 4.4e-233 811.6 653 66.2
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 4.4e-233 811.6 652 65.6
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.7e-232 809.7 656 65.5
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 8.3e-232 807.4 661 66.1
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 1.2e-230 803.5 660 65.6
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 4.5e-230 801.6 657 64.8
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 5.9e-230 801.2 668 64.1
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 1.0e-229 800.4 668 64.1
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 2.9e-229 798.9 669 66.5
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.1e-227 792.7 667 63.6
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.4e-226 790.0 653 62.5
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 6.8e-226 787.7 666 63.8
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 6.3e-224 781.2 650 63.1
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 7.0e-223 777.7 661 60.8
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 1.2e-222 776.9 651 63.4
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 3.5e-222 775.4 635 65.8
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.3e-221 773.5 622 66.1
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 2.9e-221 772.3 658 62.9
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 2.9e-221 772.3 658 62.9
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 4.7e-219 765.0 649 61.0
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 1.0e-218 763.8 664 62.3
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 2.3e-218 762.7 653 60.8
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 3.1e-218 762.3 670 61.0
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 2.0e-217 759.6 667 61.6
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 2.9e-216 755.7 660 61.5
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 4.9e-216 755.0 661 60.7
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.1e-215 753.8 669 61.3
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 2.4e-215 752.7 642 60.9
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 7.0e-215 751.1 664 60.5
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.6e-214 750.0 669 61.4
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 2.7e-214 749.2 657 60.9
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 1.0e-213 747.3 660 60.6
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 3.9e-213 745.3 659 59.6
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 3.9e-213 745.3 662 60.1
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 5.0e-213 745.0 642 60.0
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 1.9e-212 743.0 670 60.9
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 4.3e-212 741.9 691 59.2
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 5.6e-212 741.5 672 60.9
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 1.2e-211 740.3 651 61.3
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 1.6e-211 740.0 649 59.9
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 6.2e-211 738.0 672 60.7
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 1.1e-210 737.3 643 61.1
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 1.1e-210 737.3 651 62.8
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.1e-210 737.3 662 60.6
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 2.3e-210 736.1 652 60.4
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 2.6e-209 732.6 651 60.7
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 1.3e-208 730.3 660 59.7
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 1.7e-208 729.9 650 63.1
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 2.9e-208 729.2 639 59.9
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 6.4e-208 728.0 655 60.0
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 1.1e-207 727.2 648 60.3
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 3.2e-207 725.7 650 60.9
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 6.0e-206 721.5 652 59.2
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.0e-205 720.7 713 56.9
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 3.9e-205 718.8 654 58.1
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 7.3e-204 714.5 667 59.4
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 2.1e-203 713.0 661 58.7
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 2.3e-202 709.5 647 59.4
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 3.4e-201 705.7 661 56.6
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 3.4e-201 705.7 615 61.8
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 7.5e-201 704.5 647 59.4
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 9.9e-201 704.1 643 58.6
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 5.4e-199 698.4 641 58.3
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 4.6e-198 695.3 641 58.2
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.3e-197 693.7 565 64.6
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.5e-196 690.3 562 64.8
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 9.5e-196 687.6 689 54.4
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 2.6e-193 679.5 527 67.2
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 7.6e-193 677.9 498 68.5
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.7e-192 676.8 641 56.5
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 3.9e-189 665.6 657 55.9
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.4e-185 652.5 542 62.2
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.9e-176 622.1 655 54.7
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 6.7e-173 611.7 526 62.7
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 2.5e-172 609.8 511 62.0
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 5.6e-172 608.6 668 51.8
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 4.8e-171 605.5 688 51.2
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 2.9e-168 596.3 646 51.5
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 1.1e-164 584.3 699 48.6
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 1.1e-162 577.8 515 57.7
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.0e-157 559.7 574 54.7
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.1e-156 557.8 485 63.7
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 6.5e-152 542.0 538 55.0
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 3.3e-140 503.1 644 45.3
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 2.0e-137 493.8 436 62.6
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 2.6e-124 450.3 533 51.4
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 1.9e-119 434.1 683 40.7
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 1.5e-116 424.5 747 37.1
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 3.0e-109 400.2 387 60.7
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 7.5e-108 395.6 569 42.4
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 2.5e-103 380.6 335 63.6
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 2.2e-99 367.5 290 69.7
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 3.0e-96 357.1 280 62.5
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.1e-90 338.6 650 36.6
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 7.3e-87 325.9 288 63.5
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 1.2e-86 325.1 345 57.1
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.2e-84 318.5 487 40.0
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 3.9e-80 303.5 423 49.2
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 1.9e-79 301.2 287 58.5
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.9e-74 284.6 329 50.5
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.6e-68 264.2 203 68.5
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 2.5e-63 247.7 176 69.3
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 1.6e-62 245.0 383 42.3
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 9.9e-60 235.7 149 75.8
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 2.9e-59 234.2 374 42.8
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 4.3e-55 220.3 197 61.4
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 7.4e-47 193.0 155 61.9
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 7.9e-41 172.9 239 42.3
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 1.2e-36 159.1 630 29.7
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 1.6e-33 148.7 93 71.0
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 2.4e-29 134.8 176 48.9
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 2.7e-17 94.7 92 53.3
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 6.1e-17 93.6 111 53.2
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 3.0e-16 91.3 71 62.0
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 1.5e-15 89.0 153 39.2
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 2.2e-14 85.1 59 71.2
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 6.3e-14 83.6 63 63.5
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 1.6e-12 79.0 108 48.1
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 5.9e-12 77.0 55 61.8
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 1.7e-11 75.5 55 65.5
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 2.2e-11 75.1 100 42.0
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 4.2e-10 70.9 108 42.6


User provided reference genes

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