Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 0.0e+00 1396.3 725 100.0
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 1.3e-289 999.6 722 69.7
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 9.9e-287 989.9 666 72.5
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 4.2e-285 984.6 663 71.3
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 1.6e-284 982.6 663 71.5
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 2.7e-284 981.9 663 72.1
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 7.9e-284 980.3 664 71.2
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 1.3e-283 979.5 720 67.1
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 3.9e-283 978.0 664 71.2
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 3.3e-282 974.9 665 71.1
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 9.6e-282 973.4 661 70.7
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.3e-281 973.0 689 69.4
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 4.8e-281 971.1 665 70.1
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 5.8e-279 964.1 662 70.5
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 1.4e-277 959.5 662 70.2
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 2.5e-277 958.7 664 69.7
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 4.6e-276 954.5 663 68.9
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.8e-275 952.6 727 65.1
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 2.3e-275 952.2 667 69.3
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 4.8e-273 944.5 666 68.3
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 6.3e-273 944.1 720 66.2
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 3.1e-272 941.8 703 67.0
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 5.3e-272 941.0 665 68.4
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 6.9e-272 940.6 697 67.1
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 5.9e-271 937.6 663 69.2
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 8.5e-270 933.7 664 68.4
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 1.6e-268 929.5 665 68.3
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 2.1e-268 929.1 671 68.6
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 3.6e-268 928.3 665 67.7
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 1.8e-267 926.0 665 67.5
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 1.8e-267 926.0 664 67.3
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 6.7e-267 924.1 726 63.8
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 5.7e-266 921.0 664 67.0
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 7.4e-266 920.6 663 67.1
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 1.6e-265 919.5 667 67.3
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 1.1e-264 916.8 665 67.4
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 1.4e-264 916.4 667 67.2
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 1.4e-264 916.4 665 67.1
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 6.9e-264 914.1 662 66.3
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 4.5e-263 911.4 662 66.2
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 1.0e-262 910.2 664 67.5
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 1.3e-262 909.8 664 68.7
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 1.7e-262 909.4 657 66.7
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 1.7e-262 909.4 663 68.0
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 2.9e-262 908.7 662 65.9
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 3.8e-262 908.3 664 66.6
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 1.4e-261 906.4 690 64.2
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 4.2e-261 904.8 654 67.9
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 5.5e-261 904.4 662 66.6
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 7.2e-261 904.0 664 65.4
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 9.4e-261 903.7 661 68.1
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 9.4e-261 903.7 664 66.0
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 4.6e-260 901.4 662 65.1
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 4.6e-260 901.4 662 65.6
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.4e-259 899.8 682 65.4
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 3.9e-259 898.3 662 65.1
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 5.1e-259 897.9 663 66.7
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 6.7e-259 897.5 662 65.4
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 8.8e-259 897.1 682 65.2
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 1.1e-258 896.7 722 63.4
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 1.5e-258 896.3 662 64.4
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 1.5e-258 896.3 666 65.0
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.6e-258 895.6 662 64.8
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 2.6e-258 895.6 662 64.5
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 4.4e-258 894.8 662 64.4
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 4.4e-258 894.8 662 64.2
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 1.3e-257 893.3 619 71.1
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 2.2e-257 892.5 662 66.8
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 4.8e-257 891.3 664 64.5
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 4.8e-257 891.3 663 66.2
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 5.3e-256 887.9 663 66.7
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 1.5e-255 886.3 662 64.7
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 3.9e-251 871.7 653 66.3
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.4e-248 862.4 692 63.3
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 5.3e-248 861.3 662 65.4
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 2.3e-243 845.9 664 63.6
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 7.5e-242 840.9 687 62.0
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 6.5e-238 827.8 669 61.1
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 4.2e-237 825.1 663 62.6
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 1.2e-236 823.5 670 61.8
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 1.8e-235 819.7 704 60.8
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 2.3e-235 819.3 666 60.8
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 1.8e-227 793.1 618 64.2
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 6.8e-227 791.2 663 60.8
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 8.0e-220 767.7 522 69.9
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 7.5e-218 761.1 965 45.0
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.9e-217 759.2 635 61.6
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 7.0e-216 754.6 665 59.2
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 7.8e-215 751.1 574 65.0
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 2.1e-212 743.0 515 69.7
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 1.5e-210 736.9 477 74.2
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 1.3e-209 733.8 664 56.0
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 9.2e-208 727.6 480 73.3
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 1.1e-197 694.1 668 56.1
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 7.6e-194 681.4 639 56.0
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 5.4e-192 675.2 582 58.9
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 5.3e-179 632.1 655 49.8
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 3.0e-174 616.3 431 69.8
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 4.0e-171 605.9 672 47.8
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 1.3e-148 531.2 405 63.0
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 1.8e-142 510.8 334 73.7
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 1.5e-133 481.1 519 46.8
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 2.6e-133 480.3 389 59.4
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 2.3e-126 457.2 395 59.2
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 1.2e-119 434.9 436 48.9
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 7.0e-115 419.1 291 68.4
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 1.6e-114 417.9 327 62.1
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 5.0e-97 359.8 277 63.5
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.1e-96 358.6 310 57.4
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 6.8e-94 349.4 628 37.1
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 4.9e-92 343.2 284 58.5
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 9.5e-88 328.9 359 49.3
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 1.8e-86 324.7 236 68.6
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 1.7e-81 308.1 240 61.7
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.4e-78 298.5 284 53.5
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 8.7e-73 279.3 234 61.1
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-71 273.9 386 38.3
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 9.9e-69 265.8 646 33.0
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 2.4e-67 261.2 430 37.4
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 1.8e-62 245.0 633 30.0
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 1.6e-42 178.7 277 39.0
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 1.6e-42 178.7 355 37.2
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 3.1e-38 164.5 138 60.1
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 9.4e-35 152.9 112 75.9
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 2.1e-34 151.8 93 75.3
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.3e-33 148.3 216 40.7
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.0e-32 145.2 224 38.8
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 1.3e-31 142.5 103 68.0
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.4e-30 139.0 217 39.2
Actinidia30670 Actinidia chinensis HOM05D005075 ORTHO05D007097 2.8e-23 114.8 124 51.6
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 1.1e-22 112.8 86 59.3
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis HOM05D005075 ORTHO05D007097 5.0e-20 104.0 72 66.7
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 7.2e-19 100.1 331 30.5
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 3.6e-18 97.8 90 47.8
COL.COLO4_15613 Corchorus olitorius HOM05D005075 ORTHO05D162910 9.7e-16 89.7 420 24.0
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 2.4e-14 85.1 396 24.5
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 9.1e-14 83.2 87 48.3
MD16G1112100 Malus domestica HOM05D005075 ORTHO05D037935 2.6e-13 81.6 60 70.0
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 7.7e-13 80.1 46 71.7
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.2e-12 78.6 53 60.4
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.9e-12 78.2 46 69.6
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.2e-11 74.7 46 67.4
MD16G1112400 Malus domestica HOM05D005075 ORTHO05D007097 3.2e-11 74.7 126 42.1
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 7.2e-11 73.6 50 62.0
Cfa026189 Carpinus fangiana HOM05D002287 ORTHO05D123242 3.6e-10 71.2 68 47.1
Atru.chr11.2270 Acer truncatum HOM05D005075 ORTHO05D037935 2.0e-08 65.5 47 68.1
Sabra10G0048500 Salix brachista HOM05D005075 ORTHO05D007097 1.7e-07 62.4 42 64.3


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