Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 7.4e-275 949.9 471 100.0
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 1.0e-223 780.0 472 79.2
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.3e-222 775.0 462 79.7
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.8e-221 771.9 462 78.8
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 8.9e-220 766.9 471 76.6
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.2e-219 766.5 473 77.6
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 3.4e-219 765.0 465 78.7
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.3e-218 763.1 470 76.8
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 2.2e-218 762.3 465 77.8
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 8.3e-218 760.4 471 77.1
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.9e-217 759.2 463 78.2
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.4e-217 758.8 467 77.5
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 9.2e-217 756.9 462 77.9
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.6e-216 756.1 464 77.4
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.0e-216 755.7 462 77.9
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 7.8e-216 753.8 465 76.3
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 1.0e-215 753.4 464 77.2
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.9e-215 751.5 461 75.9
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 5.0e-215 751.1 463 76.2
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 5.0e-215 751.1 465 76.6
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.9e-214 749.2 479 74.7
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 8.1e-213 743.8 489 74.2
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 3.4e-211 738.4 463 73.7
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 3.4e-211 738.4 463 74.3
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 5.8e-211 737.6 464 75.2
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 5.8e-211 737.6 463 75.2
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 5.8e-211 737.6 466 75.5
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 9.9e-211 736.9 463 73.9
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.7e-210 736.1 463 74.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.2e-210 735.7 468 74.4
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 2.9e-210 735.3 467 74.1
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.7e-210 734.9 495 71.7
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 8.3e-210 733.8 495 71.9
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.4e-209 733.0 463 74.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.1e-209 731.5 498 71.5
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 4.1e-209 731.5 503 70.2
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 5.4e-209 731.1 465 73.8
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.5e-206 722.2 461 73.1
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 4.3e-206 721.5 463 72.8
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 7.3e-206 720.7 463 73.4
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 2.1e-205 719.2 463 72.6
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 3.6e-205 718.4 463 72.6
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 5.2e-204 714.5 464 73.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 8.9e-204 713.8 461 72.5
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 7.6e-203 710.7 465 72.5
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.2e-202 709.1 466 72.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 2.2e-202 709.1 545 65.3
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 2.9e-202 708.8 466 71.5
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.9e-201 706.1 500 68.2
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 9.2e-201 703.7 461 73.1
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 1.5e-198 696.4 466 71.7
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 2.8e-197 692.2 497 66.8
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.8e-196 689.5 504 66.1
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 4.0e-196 688.3 462 69.5
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.0e-195 686.0 538 63.4
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.1e-188 662.1 474 68.6
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.9e-186 654.8 465 68.6
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 6.4e-186 654.4 464 68.8
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.4e-185 653.3 461 67.2
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 2.4e-185 652.5 402 75.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.6e-184 649.8 466 65.0
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.3e-183 646.0 393 78.9
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 7.4e-182 641.0 463 65.4
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 2.4e-180 636.0 461 64.4
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.0e-179 632.9 382 78.3
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 7.6e-179 630.9 459 66.9
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 4.9e-178 628.2 416 71.9
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 3.2e-177 625.5 409 71.9
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 3.2e-177 625.5 409 71.9
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.9e-175 618.6 417 70.7
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.1e-174 617.1 463 65.4
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.0e-167 594.0 463 63.7
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 3.9e-167 592.0 365 78.6
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 4.3e-166 588.6 492 61.4
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 5.7e-166 588.2 398 70.1
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 4.2e-161 572.0 465 61.5
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 3.1e-156 555.8 328 79.0
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 2.3e-151 539.7 331 77.9
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.0e-151 539.3 368 71.7
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.3e-143 513.1 368 70.1
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 5.2e-119 432.2 266 76.7
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.4e-95 354.4 224 71.9
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 9.9e-70 268.5 452 32.7
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 3.2e-68 263.5 168 72.6
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 5.3e-63 246.1 149 79.9
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 7.1e-60 235.7 235 56.6
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 5.8e-54 216.1 159 70.4
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.6e-43 181.4 119 68.1
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 4.8e-32 143.3 445 27.0
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 6.3e-24 116.3 453 25.6
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.0e-22 111.3 77 66.2
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 6.5e-21 106.3 426 25.6
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.6e-19 101.7 334 26.0
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 8.0e-19 99.4 483 24.4
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.1e-15 89.0 57 75.4
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 5.5e-12 76.6 411 24.6
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 1.8e-10 71.6 360 25.3
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 3.5e-06 57.4 36 75.0


User provided reference genes

Program Settings