Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.4e-226 787.7 423 100.0
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.4e-208 728.8 429 87.9
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 2.4e-152 542.7 433 65.1
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 1.3e-148 530.4 447 63.1
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 4.0e-147 525.4 452 63.1
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.7e-145 520.0 453 60.7
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.4e-144 516.9 450 61.3
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 4.2e-144 515.4 447 61.3
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 5.5e-144 515.0 454 63.2
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 5.5e-144 515.0 454 63.2
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 2.7e-143 512.7 393 67.4
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 1.8e-142 510.0 447 62.6
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.0e-142 509.2 444 61.3
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 8.7e-142 507.7 456 61.8
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 8.7e-142 507.7 388 67.8
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.8e-139 500.0 452 59.7
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 6.9e-139 498.0 448 59.2
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 6.9e-139 498.0 392 66.3
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 1.2e-138 497.3 390 64.4
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 2.0e-138 496.5 391 65.2
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 2.0e-138 496.5 451 57.9
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 2.6e-138 496.1 433 62.1
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 2.6e-138 496.1 446 59.0
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 5.9e-138 495.0 458 59.2
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.3e-137 493.8 388 65.2
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 1.3e-137 493.8 390 64.4
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 2.9e-137 492.7 346 72.3
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 3.8e-137 492.3 450 58.4
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 1.1e-136 490.7 456 59.6
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.1e-136 490.7 448 58.9
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 3.2e-136 489.2 377 66.8
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 5.5e-136 488.4 454 60.4
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.2e-135 487.3 388 65.2
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 1.6e-135 486.9 430 61.4
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 3.6e-135 485.7 449 58.1
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 6.1e-135 485.0 388 64.7
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 7.9e-135 484.6 391 63.4
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 7.9e-135 484.6 252 94.8
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 1.0e-134 484.2 384 64.6
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 3.0e-134 482.6 391 63.4
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 3.0e-134 482.6 373 65.7
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 3.0e-134 482.6 335 72.5
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 3.9e-134 482.3 404 62.1
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 1.1e-133 480.7 392 63.8
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 1.1e-133 480.7 391 62.9
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 1.9e-133 479.9 389 63.0
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.5e-133 479.6 451 58.1
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 4.3e-133 478.8 449 59.0
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.7e-133 477.6 423 66.4
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.7e-132 476.9 383 70.0
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.8e-132 476.1 395 63.3
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 3.7e-132 475.7 389 62.5
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 4.8e-132 475.3 390 63.1
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 6.3e-132 474.9 475 53.9
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 1.1e-131 474.2 391 62.9
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 1.4e-131 473.8 444 58.3
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 1.4e-131 473.8 332 70.8
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 1.4e-131 473.8 458 57.0
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 1.8e-131 473.4 394 63.5
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.8e-131 473.4 395 63.3
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 5.3e-131 471.9 391 62.7
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 3.4e-130 469.2 392 61.0
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 4.5e-130 468.8 395 62.5
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 7.7e-130 468.0 451 56.8
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 1.0e-129 467.6 376 63.6
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 1.0e-129 467.6 388 62.4
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 1.0e-129 467.6 454 55.7
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 1.1e-128 464.2 389 62.5
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 1.9e-128 463.4 438 56.6
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 3.2e-128 462.6 383 62.9
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 4.2e-128 462.2 333 68.2
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 7.2e-128 461.5 440 56.8
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 2.1e-127 459.9 381 61.4
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 2.7e-127 459.5 445 56.9
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 1.0e-126 457.6 388 61.3
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.4e-126 457.2 319 74.9
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.4e-126 457.2 440 57.0
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 8.8e-126 454.5 421 59.1
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 2.6e-125 453.0 450 54.0
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 3.3e-125 452.6 449 55.2
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 4.4e-125 452.2 373 63.0
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 4.4e-125 452.2 373 63.0
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 7.4e-125 451.4 394 60.2
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 1.3e-124 450.7 412 59.7
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.8e-124 449.5 383 62.9
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 1.1e-123 447.6 443 52.8
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 2.0e-122 443.4 400 60.5
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 2.2e-121 439.9 389 59.9
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 5.0e-121 438.7 379 59.6
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 2.5e-120 436.4 334 67.4
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 2.1e-119 433.3 378 60.1
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.2e-118 428.7 391 63.9
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.8e-116 422.9 303 69.3
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 4.2e-112 409.1 255 76.5
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 3.6e-111 406.0 334 62.6
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 4.0e-110 402.5 341 60.4
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 4.0e-110 402.5 339 59.6
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 5.2e-110 402.1 460 51.5
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.4e-107 394.0 255 72.2
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 5.9e-106 388.7 388 52.8
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 2.9e-105 386.3 392 54.6
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 1.9e-104 383.6 372 57.0
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 2.3e-102 376.7 362 53.9
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.4e-99 367.5 373 55.0
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 5.9e-98 362.1 305 63.3
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 1.0e-89 334.7 243 66.3
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 3.8e-89 332.8 355 49.6
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 3.3e-88 329.7 328 50.3
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 3.6e-87 326.2 270 60.0
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 8.0e-87 325.1 366 47.8
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 1.8e-86 323.9 394 46.2
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 4.4e-85 319.3 359 47.4
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 8.3e-84 315.1 300 57.3
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 6.2e-79 298.9 327 48.9
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 8.0e-79 298.5 272 60.3
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 2.1e-66 257.3 238 54.6
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 4.6e-50 203.0 273 42.1
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 6.0e-50 202.6 234 50.4
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 4.3e-48 196.4 163 59.5
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 8.4e-44 182.2 286 41.6
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 8.7e-33 145.6 93 69.9
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 1.1e-30 138.7 122 56.6
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.6e-29 134.0 127 58.3
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 1.3e-28 131.7 323 31.3
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 8.7e-25 119.0 134 51.5
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 2.5e-24 117.5 99 62.6
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 2.8e-23 114.0 196 34.2
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 6.5e-20 102.8 192 39.6
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 1.6e-18 98.2 138 50.0
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 3.1e-14 84.0 73 63.0
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 4.5e-13 80.1 148 42.6


User provided reference genes

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