Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 2.7e-135 485.3 246 100.0
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 4.7e-95 351.7 242 74.4
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 5.1e-94 348.2 245 72.7
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 8.8e-94 347.4 245 72.7
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 8.2e-92 340.9 248 71.4
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.3e-89 333.6 247 71.3
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 6.5e-89 331.3 251 69.7
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.9e-88 329.7 245 71.4
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 9.4e-88 327.4 212 77.8
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 8.0e-87 324.3 251 68.9
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 8.0e-87 324.3 248 69.8
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.8e-86 323.2 251 68.1
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.8e-86 323.2 249 67.5
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 2.3e-86 322.8 245 69.8
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 2.3e-86 322.8 247 69.6
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 3.0e-86 322.4 250 69.6
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 5.2e-86 321.6 242 67.4
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 6.7e-86 321.2 246 69.5
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 3.3e-85 318.9 247 66.8
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 5.7e-85 318.2 242 66.9
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.7e-85 317.4 242 66.5
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 9.7e-85 317.4 245 68.6
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.7e-84 316.6 240 68.8
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.7e-84 316.6 240 68.8
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 1.7e-84 316.6 257 66.1
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 3.7e-84 315.5 257 65.0
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 6.3e-84 314.7 252 67.1
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 8.2e-84 314.3 211 75.8
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.1e-83 312.4 249 67.5
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 2.7e-82 309.3 253 64.4
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 5.9e-82 308.1 254 66.5
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.7e-82 307.8 256 63.7
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 7.7e-82 307.8 251 64.5
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.3e-81 307.0 255 63.9
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 1.7e-81 306.6 254 64.6
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.7e-81 306.6 238 66.8
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 3.8e-81 305.4 239 65.3
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 1.5e-80 303.5 252 64.7
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 4.2e-80 302.0 239 64.4
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 7.2e-80 301.2 256 64.1
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 2.1e-79 299.7 242 64.0
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 2.1e-79 299.7 241 65.1
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.6e-79 298.9 271 59.8
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 3.6e-79 298.9 240 65.4
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 6.1e-79 298.1 241 65.1
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 6.1e-79 298.1 238 63.4
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 8.0e-79 297.7 228 67.1
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 1.4e-78 297.0 241 64.7
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 2.3e-78 296.2 246 62.6
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 4.0e-78 295.4 273 59.3
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 4.0e-78 295.4 246 63.4
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 5.2e-78 295.0 180 78.3
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 6.8e-78 294.7 258 60.9
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.5e-77 293.5 172 79.7
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 4.4e-77 292.0 235 64.7
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 7.5e-77 291.2 240 65.4
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 7.5e-77 291.2 242 64.9
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 9.8e-77 290.8 255 60.0
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 1.3e-76 290.4 239 61.9
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 1.7e-76 290.0 246 60.6
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.2e-76 289.7 242 60.7
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 2.2e-76 289.7 213 69.0
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 4.8e-76 288.5 162 85.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 6.3e-76 288.1 251 59.8
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.4e-75 286.2 253 62.8
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 4.1e-75 285.4 172 79.1
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 4.1e-75 285.4 253 61.3
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 4.1e-75 285.4 245 60.8
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 7.0e-75 284.6 212 69.8
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 7.0e-75 284.6 254 61.0
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 9.1e-75 284.3 297 54.9
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 1.6e-74 283.5 246 63.0
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 2.0e-74 283.1 242 62.0
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 4.5e-74 282.0 215 67.9
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 1.0e-73 280.8 246 59.3
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 6.5e-73 278.1 212 67.0
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.2e-72 275.8 261 55.6
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 3.2e-72 275.8 212 66.0
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 4.2e-72 275.4 267 56.9
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 4.2e-72 275.4 267 56.9
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 7.2e-72 274.6 265 57.4
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.2e-71 273.9 252 60.7
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.6e-71 272.3 265 58.1
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 8.0e-71 271.2 251 59.0
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 8.0e-71 271.2 183 69.9
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 2.3e-70 269.6 213 65.7
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 2.3e-70 269.6 251 58.6
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 3.0e-70 269.2 230 62.2
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 6.8e-70 268.1 235 60.4
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.5e-69 266.9 244 59.0
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.4e-69 265.4 210 66.2
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 2.8e-68 262.7 211 62.6
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.8e-67 260.0 247 59.1
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 4.3e-64 248.8 210 59.0
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 9.5e-64 247.7 193 61.1
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 9.5e-64 247.7 256 53.5
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 8.0e-63 244.6 274 52.2
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 1.4e-62 243.8 144 82.6
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 2.3e-62 243.0 213 57.3
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 5.7e-61 238.4 144 81.2
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 4.9e-60 235.3 244 54.9
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 5.4e-59 231.9 217 58.5
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.8e-54 216.9 172 66.3
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 1.3e-49 200.7 134 73.9
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 2.5e-48 196.4 219 47.0
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.1e-46 191.0 182 61.0
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.6e-45 186.4 245 48.6
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 3.7e-44 182.6 157 59.2
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 9.2e-43 177.9 169 49.1
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 1.1e-40 171.0 168 48.2
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 4.3e-40 169.1 167 50.9
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.4e-38 164.1 169 55.0
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 4.0e-38 162.5 95 81.1
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 7.1e-35 151.8 156 55.8
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 1.2e-34 151.0 154 57.1
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-30 137.9 142 55.6
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 4.4e-29 132.5 96 68.8
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 3.6e-23 112.8 68 79.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-14 84.7 183 29.0
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 1.8e-14 84.0 129 35.7
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 1.3e-12 77.8 204 27.9
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 5.6e-08 62.4 62 50.0
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 4.0e-06 56.2 35 74.3


User provided reference genes

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