Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04419 Eucalyptus grandis HOM05D010912 ORTHO05D009926 2.6e-14 81.6 70 100.0
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 1.9e-09 65.5 44 79.5
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 1.6e-08 62.4 47 70.2
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 2.1e-08 62.0 27 81.5
Manes.09G159200 Manihot esculenta HOM05D008278 ORTHO05D009926 2.1e-08 62.0 40 67.5
MD04G1216200 Malus domestica HOM05D010912 ORTHO05D009926 6.1e-08 60.5 40 62.5
CiPaw.07G010500 Carya illinoinensis HOM05D010912 ORTHO05D009926 1.0e-07 59.7 27 81.5
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 1.4e-07 59.3 39 59.0
Gohir.A11G257700 Gossypium hirsutum HOM05D010912 ORTHO05D009926 2.3e-07 58.5 44 75.0
MD04G1216300 Malus domestica HOM05D010912 ORTHO05D009926 2.3e-07 58.5 27 77.8
GSVIVG01021911001 Vitis vinifera HOM05D008278 ORTHO05D009926 2.3e-07 58.5 26 80.8
Phvul.006G097300 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 3.0e-07 58.2 41 65.9
FvH4_6g04120 Fragaria vesca HOM05D010912 ORTHO05D009926 4.0e-07 57.8 26 80.8
FAN02G3698 Fragaria x ananassa HOM05D010912 ORTHO05D009926 4.0e-07 57.8 26 80.8
FAN05G5084 Fragaria x ananassa HOM05D010912 ORTHO05D009926 4.0e-07 57.8 26 80.8
FAN05G5515 Fragaria x ananassa HOM05D010912 ORTHO05D009926 4.0e-07 57.8 26 80.8
FAN14G0650 Fragaria x ananassa HOM05D010912 ORTHO05D009926 4.0e-07 57.8 26 80.8
Gohir.A11G257600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 4.0e-07 57.8 38 73.7
Gohir.D11G267600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 4.0e-07 57.8 38 73.7
Gorai.007G287300 Gossypium raimondii HOM05D010912 ORTHO05D009926 4.0e-07 57.8 38 73.7
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 5.2e-07 57.4 39 61.5
CiPaw.07G100700 Carya illinoinensis HOM05D008278 ORTHO05D009926 8.8e-07 56.6 39 59.0
CiPaw.02G086800 Carya illinoinensis HOM05D008278 ORTHO05D009926 1.2e-06 56.2 46 65.2
Sc16g0008190 Simmondsia chinensis HOM05D010912 ORTHO05D009926 1.2e-06 56.2 37 67.6
Thecc.01G291200 Theobroma cacao HOM05D008278 ORTHO05D009926 1.5e-06 55.8 40 60.0
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 2.0e-06 55.5 38 57.9
COL.COLO4_08021 Corchorus olitorius HOM05D008278 ORTHO05D009926 3.3e-06 54.7 40 57.5
Haze_04293 Corylus avellana HOM05D010912 ORTHO05D009926 3.3e-06 54.7 26 73.1
PSO170G0879 Papaver somniferum HOM05D008278 ORTHO05D009926 3.3e-06 54.7 26 76.9
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 3.3e-06 54.7 27 70.4
Aqoxy5G00615 Aquilegia oxysepala HOM05D008278 ORTHO05D009926 4.4e-06 54.3 27 70.4
CiPaw.08G100100 Carya illinoinensis HOM05D008278 ORTHO05D009926 7.5e-06 53.5 39 59.0
Gohir.A11G117700 Gossypium hirsutum HOM05D008278 ORTHO05D009926 7.5e-06 53.5 39 59.0
Gorai.007G131400 Gossypium raimondii HOM05D008278 ORTHO05D009926 7.5e-06 53.5 39 59.0
Potri.013G031800 Populus trichocarpa HOM05D010912 ORTHO05D009926 7.5e-06 53.5 37 56.8
RcHm_v2.0_Chr3g0452671 Rosa chinensis HOM05D010912 ORTHO05D009926 7.5e-06 53.5 26 69.2
TWI09G1464 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 7.5e-06 53.5 40 57.5
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 9.7e-06 53.1 38 63.2
Medtr7g108080 Medicago truncatula HOM05D008278 ORTHO05D009926 9.7e-06 53.1 27 70.4


User provided reference genes

Program Settings