Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 9.0e-42 172.9 75 100.0
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 3.3e-28 127.9 75 69.3
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 5.7e-28 127.1 76 72.4
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 6.3e-27 123.6 78 67.9
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 8.2e-27 123.2 76 67.1
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 5.9e-25 117.1 77 63.6
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 1.3e-24 115.9 69 69.6
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 1.7e-24 115.5 78 65.4
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 3.2e-23 111.3 75 64.0
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 2.3e-21 105.1 74 63.5
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 5.2e-21 104.0 69 62.3
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 5.0e-16 87.4 76 50.0
Actinidia30915 Actinidia chinensis HOM05D008295 ORTHO05D010471 4.2e-15 84.3 59 61.0
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 9.4e-15 83.2 71 53.5
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.2e-14 82.8 76 50.0
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 6.8e-13 77.0 58 53.4
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 3.4e-12 74.7 62 43.5
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 7.5e-12 73.6 71 42.3
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 9.7e-12 73.2 66 45.5
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 9.7e-12 73.2 66 45.5
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 1.7e-11 72.4 66 45.5
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 2.2e-11 72.0 66 45.5
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 2.2e-11 72.0 66 45.5
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 2.8e-11 71.6 66 45.5
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 2.8e-11 71.6 66 45.5
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 3.7e-11 71.2 66 43.9
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 3.7e-11 71.2 66 43.9
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 3.7e-11 71.2 66 43.9
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 4.8e-11 70.9 52 57.7
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 4.8e-11 70.9 66 43.9
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 4.8e-11 70.9 69 43.5
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 4.8e-11 70.9 69 43.5
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 6.3e-11 70.5 69 43.5
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 6.3e-11 70.5 69 43.5
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 6.3e-11 70.5 69 43.5
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 8.3e-11 70.1 66 43.9
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 1.1e-10 69.7 69 43.5
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-10 69.7 69 43.5
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.8e-10 68.9 58 48.3
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 2.4e-10 68.6 71 40.8
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 2.4e-10 68.6 69 43.5
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 2.4e-10 68.6 69 43.5
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 2.4e-10 68.6 71 43.7
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 2.4e-10 68.6 69 43.5
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 9.1e-10 66.6 66 42.4
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 9.1e-10 66.6 73 38.4
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 1.6e-09 65.9 66 40.9
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 2.7e-09 65.1 66 40.9
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 2.7e-09 65.1 66 40.9
BolC5t34889H Brassica oleracea HOM05D008295 ORTHO05D010471 6.5e-08 60.5 56 42.9
C05p62350 Brassica napus HOM05D008295 ORTHO05D010471 3.2e-07 58.2 50 46.0
AL3G15270 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 5.5e-07 57.4 80 32.5


User provided reference genes

Program Settings