Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.7e-54 214.2 100 100.0
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.2e-34 147.9 120 64.2
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.9e-32 141.4 133 57.9
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.1e-32 141.0 133 57.9
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.1e-30 135.6 133 57.9
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 8.1e-30 133.7 133 53.4
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 1.4e-29 132.9 133 54.9
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 1.4e-29 132.9 133 53.4
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.4e-29 132.9 133 55.6
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 1.8e-29 132.5 133 54.1
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 1.8e-29 132.5 133 54.1
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 2.4e-29 132.1 133 54.1
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 3.1e-29 131.7 133 54.1
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 3.1e-29 131.7 133 53.4
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 9.0e-29 130.2 133 53.4
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 9.0e-29 130.2 133 51.9
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 1.2e-28 129.8 133 54.1
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 1.5e-28 129.4 132 50.0
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 1.5e-28 129.4 132 51.5
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 2.0e-28 129.0 133 51.9
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 2.0e-28 129.0 133 52.6
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 2.0e-28 129.0 133 53.4
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 2.0e-28 129.0 133 52.6
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 3.4e-28 128.3 133 50.4
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 3.4e-28 128.3 125 56.8
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 3.4e-28 128.3 125 54.4
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 4.4e-28 127.9 133 51.9
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 4.4e-28 127.9 133 52.6
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 5.8e-28 127.5 133 52.6
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 5.8e-28 127.5 133 53.4
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 5.8e-28 127.5 133 52.6
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 7.6e-28 127.1 137 48.2
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 9.9e-28 126.7 125 52.8
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.9e-28 126.7 132 53.8
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 9.9e-28 126.7 133 52.6
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.7e-27 125.9 133 51.9
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 2.2e-27 125.6 133 51.9
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 3.8e-27 124.8 139 49.6
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 3.8e-27 124.8 156 47.4
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 3.8e-27 124.8 133 50.4
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 4.9e-27 124.4 133 51.9
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 6.4e-27 124.0 133 49.6
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 6.4e-27 124.0 132 53.0
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 6.4e-27 124.0 129 51.9
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 6.4e-27 124.0 133 51.9
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 6.4e-27 124.0 132 50.0
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 8.4e-27 123.6 133 52.6
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 1.1e-26 123.2 133 50.4
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.4e-26 122.9 133 52.6
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.4e-26 122.9 135 51.1
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.4e-26 122.9 133 51.1
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 2.4e-26 122.1 125 53.6
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 3.2e-26 121.7 133 48.9
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 3.2e-26 121.7 131 51.1
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 4.2e-26 121.3 132 50.0
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 7.1e-26 120.6 133 50.4
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 9.3e-26 120.2 133 48.9
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 9.3e-26 120.2 133 48.1
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 9.3e-26 120.2 125 53.6
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 9.3e-26 120.2 132 51.5
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 1.2e-25 119.8 125 52.0
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 1.2e-25 119.8 132 52.3
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 1.6e-25 119.4 132 50.8
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 1.6e-25 119.4 125 51.2
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 1.6e-25 119.4 132 50.8
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 2.1e-25 119.0 132 49.2
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 2.7e-25 118.6 133 48.9
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 2.7e-25 118.6 133 47.4
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 3.5e-25 118.2 125 52.8
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 4.6e-25 117.9 125 50.4
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 6.0e-25 117.5 132 50.8
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 6.0e-25 117.5 133 48.9
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 7.8e-25 117.1 125 50.4
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 1.0e-24 116.7 125 51.2
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.0e-24 116.7 133 49.6
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 1.3e-24 116.3 126 51.6
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 2.3e-24 115.5 133 51.1
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 3.9e-24 114.8 133 48.9
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 3.9e-24 114.8 125 48.8
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 5.1e-24 114.4 125 52.0
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 8.7e-24 113.6 133 48.1
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 8.7e-24 113.6 125 49.6
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 1.5e-23 112.8 150 44.0
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 2.5e-23 112.1 133 48.1
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 2.5e-23 112.1 130 49.2
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 3.3e-23 111.7 133 45.9
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 4.3e-23 111.3 125 48.8
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 4.3e-23 111.3 132 47.0
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 5.6e-23 110.9 133 45.9
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 5.6e-23 110.9 131 47.3
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 7.3e-23 110.5 133 46.6
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 9.6e-23 110.2 133 48.1
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 9.6e-23 110.2 133 45.1
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 1.3e-22 109.8 125 47.2
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.3e-22 109.8 130 43.8
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 2.1e-22 109.0 125 47.2
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 2.8e-22 108.6 133 45.1
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 2.8e-22 108.6 133 45.9
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 3.6e-22 108.2 133 45.9
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 8.1e-22 107.1 133 45.1
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.1e-22 107.1 133 45.9
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 1.1e-21 106.7 133 46.6
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 1.4e-21 106.3 125 47.2
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 1.4e-21 106.3 133 45.9
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 1.8e-21 105.9 133 46.6
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 1.8e-21 105.9 125 46.4
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.8e-21 105.9 133 48.1
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 2.4e-21 105.5 125 47.2
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 4.0e-21 104.8 124 47.6
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 1.5e-20 102.8 126 44.4
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 2.0e-20 102.4 131 44.3
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 3.4e-20 101.7 125 44.8
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 9.9e-20 100.1 132 45.5
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 1.3e-19 99.8 125 44.0
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 1.3e-19 99.8 125 44.0
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.3e-19 99.8 162 37.7
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 1.7e-19 99.4 125 44.0
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 2.2e-19 99.0 125 45.6
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 8.4e-19 97.1 102 53.9
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 9.3e-18 93.6 127 44.1
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 7.9e-17 90.5 115 45.2
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.3e-16 89.0 70 64.3
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 3.3e-15 85.1 99 45.5
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.1e-13 80.1 68 58.8
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 9.0e-13 77.0 110 38.2
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 1.2e-12 76.6 91 44.0
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 5.8e-12 74.3 68 54.4
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 7.6e-12 73.9 90 42.2
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 1.7e-11 72.8 70 54.3
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.4e-10 69.7 96 42.7
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 4.6e-09 64.7 54 55.6
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 3.0e-08 62.0 44 63.6
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 2.8e-06 55.5 114 32.5
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 8.2e-06 53.9 28 82.1


User provided reference genes

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