Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04261 Eucalyptus grandis HOM05D009218 ORTHO05D010069 1.3e-61 239.6 121 100.0
PGR004G0279 Punica granatum HOM05D011447 ORTHO05D010069 2.9e-13 79.0 135 43.7
Gorai.013G186400 Gossypium raimondii HOM05D009218 ORTHO05D010069 7.1e-12 74.3 121 40.5
Potri.013G043800 Populus trichocarpa HOM05D011447 ORTHO05D010069 7.1e-12 74.3 116 44.8
Rhsim05G0175900 Rhododendron simsii HOM05D009218 ORTHO05D010069 1.2e-11 73.6 133 40.6
Dinv05728 Davidia involucrata HOM05D009218 ORTHO05D010069 1.0e-10 70.5 123 41.5
Gohir.A13G168950 Gossypium hirsutum HOM05D009218 ORTHO05D010069 1.3e-10 70.1 122 40.2
Cpa.g.sc162.8 Carica papaya HOM05D009218 ORTHO05D010069 2.3e-10 69.3 116 41.4
Manes.08G137100 Manihot esculenta HOM05D011447 ORTHO05D010069 3.9e-10 68.6 116 38.8
Thecc.05G277300 Theobroma cacao HOM05D009218 ORTHO05D010069 5.1e-10 68.2 58 63.8
Manes.09G150100 Manihot esculenta HOM05D011447 ORTHO05D010069 6.6e-10 67.8 112 39.3
Sabra13G0040600 Salix brachista HOM05D011447 ORTHO05D010069 1.1e-09 67.0 121 41.3
Manes.08G137000 Manihot esculenta HOM05D011447 ORTHO05D010069 1.9e-09 66.2 100 43.0
Potri.019G013750 Populus trichocarpa HOM05D011447 ORTHO05D010069 2.5e-09 65.9 116 38.8
Nn3g19575 Nelumbo nucifera HOM05D011447 ORTHO05D010069 4.3e-09 65.1 57 59.6
ClCG02G016910 Citrullus lanatus HOM05D009218 ORTHO05D010069 5.6e-09 64.7 56 58.9
QL03p028391 Quercus lobata HOM05D011447 ORTHO05D010069 9.5e-09 63.9 59 59.3
QL03p029028 Quercus lobata HOM05D011447 ORTHO05D010069 9.5e-09 63.9 59 59.3
Gohir.D13G174325 Gossypium hirsutum HOM05D009218 ORTHO05D010069 1.6e-08 63.2 58 62.1
Prupe.6G347000 Prunus persica HOM05D009218 ORTHO05D010069 1.6e-08 63.2 123 39.0
COL.COLO4_15410 Corchorus olitorius HOM05D009218 ORTHO05D010069 2.1e-08 62.8 123 35.8
Potri.019G013300 Populus trichocarpa HOM05D011447 ORTHO05D010069 2.1e-08 62.8 115 38.3
Sed0020224 Sechium edule HOM05D009218 ORTHO05D010069 2.8e-08 62.4 123 39.8
CiPaw.07G070100 Carya illinoinensis HOM05D009218 ORTHO05D010069 3.6e-08 62.0 80 46.2
Potri.016G093900 Populus trichocarpa HOM05D011447 ORTHO05D010069 3.6e-08 62.0 112 42.9
Sc20g0000500 Simmondsia chinensis HOM05D009218 ORTHO05D010069 3.6e-08 62.0 72 47.2
Phvul.006G103800 Phaseolus vulgaris HOM05D020401 ORTHO05D010069 4.7e-08 61.6 133 37.6
Atru.chr2.882 Acer truncatum HOM05D009218 ORTHO05D010069 8.1e-08 60.8 57 57.9
FAN05G0115 Fragaria x ananassa HOM05D009218 ORTHO05D010069 8.1e-08 60.8 95 43.2
FAN05G4900 Fragaria x ananassa HOM05D009218 ORTHO05D010069 8.1e-08 60.8 95 43.2
CsaV3_2G003870 Cucumis sativus L. HOM05D009218 ORTHO05D010069 1.1e-07 60.5 54 61.1
Glyma.03G249100 Glycine max HOM05D020401 ORTHO05D010069 1.1e-07 60.5 118 37.3
QL03p028359 Quercus lobata HOM05D009218 ORTHO05D010069 1.1e-07 60.5 108 38.0
QL03p029061 Quercus lobata HOM05D009218 ORTHO05D010069 1.1e-07 60.5 108 38.0
Ciclev10022688m.g Citrus clementina HOM05D009218 ORTHO05D010069 2.3e-07 59.3 37 78.4
VMungo0540G0127 Vigna mungo HOM05D020401 ORTHO05D010069 2.3e-07 59.3 137 38.0
FAN02G3090 Fragaria x ananassa HOM05D009218 ORTHO05D010069 3.1e-07 58.9 95 42.1
FAN09G2898 Fragaria x ananassa HOM05D009218 ORTHO05D010069 3.1e-07 58.9 95 42.1
CAN.G1465.2 Capsicum annuum HOM05D011340 ORTHO05D010069 5.2e-07 58.2 40 65.0
FAN14G1769 Fragaria x ananassa HOM05D009218 ORTHO05D010069 5.2e-07 58.2 95 41.1
FvH4_6g02470 Fragaria vesca HOM05D009218 ORTHO05D010069 6.8e-07 57.8 95 41.1
FAN14G5335 Fragaria x ananassa HOM05D009218 ORTHO05D010069 6.8e-07 57.8 95 41.1
Nitab4.5_0022515g0010 Nicotiana tabacum HOM05D011340 ORTHO05D010069 6.8e-07 57.8 92 39.1
Sabra19G0016700 Salix brachista HOM05D011447 ORTHO05D010069 6.8e-07 57.8 48 64.6
Sabra19G0016800 Salix brachista HOM05D001365 ORTHO05D010069 6.8e-07 57.8 48 64.6
Sabra19G0026400 Salix brachista HOM05D011447 ORTHO05D010069 6.8e-07 57.8 48 64.6
MELO3C004408.2 Cucumis melo HOM05D009218 ORTHO05D010069 8.9e-07 57.4 45 66.7
RcHm_v2.0_Chr3g0450331 Rosa chinensis HOM05D009218 ORTHO05D010069 8.9e-07 57.4 110 40.9
Sabra19G0016900 Salix brachista HOM05D011447 ORTHO05D010069 8.9e-07 57.4 100 40.0
Sabra19G0026300 Salix brachista HOM05D011447 ORTHO05D010069 8.9e-07 57.4 100 40.0
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 8.9e-07 57.4 118 36.4
CiPaw.07G070200 Carya illinoinensis HOM05D009218 ORTHO05D010069 1.2e-06 57.0 49 57.1
CsaV3_2G003860 Cucumis sativus L. HOM05D009218 ORTHO05D010069 1.2e-06 57.0 37 70.3
Nitab4.5_0008548g0020 Nicotiana tabacum HOM05D011340 ORTHO05D010069 1.2e-06 57.0 92 39.1
ClCG02G016900 Citrullus lanatus HOM05D009218 ORTHO05D010069 1.5e-06 56.6 42 69.0
PGSC0003DMG400023543 Solanum tuberosum HOM05D011340 ORTHO05D010069 1.5e-06 56.6 90 38.9
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 2.0e-06 56.2 68 51.5
Nitab4.5_0000687g0100 Nicotiana tabacum HOM05D011340 ORTHO05D010069 2.6e-06 55.8 92 38.0
Sed0021944 Sechium edule HOM05D009218 ORTHO05D010069 2.6e-06 55.8 35 74.3
MELO3C004409.2 Cucumis melo HOM05D009218 ORTHO05D010069 3.4e-06 55.5 38 65.8
PGSC0003DMG400025441 Solanum tuberosum HOM05D011340 ORTHO05D010069 3.4e-06 55.5 95 35.8
Nitab4.5_0000930g0040 Nicotiana tabacum HOM05D011340 ORTHO05D010069 4.4e-06 55.1 92 38.0
Sed0017066 Sechium edule HOM05D009218 ORTHO05D010069 4.4e-06 55.1 45 60.0
Sopen04g004960 Solanum pennellii HOM05D011340 ORTHO05D010069 5.8e-06 54.7 95 36.8
Glyma.19G246700 Glycine max HOM05D020401 ORTHO05D010069 7.6e-06 54.3 96 39.6
SHI31328 Sapria himalayana HOM05D011447 ORTHO05D010069 7.6e-06 54.3 61 54.1
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 9.9e-06 53.9 101 39.6
PGSC0003DMG400025440 Solanum tuberosum HOM05D011340 ORTHO05D010069 9.9e-06 53.9 94 33.0


User provided reference genes

Program Settings