Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 6.6e-174 614.0 321 100.0
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 1.4e-75 287.3 299 57.9
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 3.0e-70 269.6 309 57.0
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 5.2e-70 268.9 253 62.8
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 2.6e-69 266.5 312 55.8
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 4.4e-69 265.8 301 56.1
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.3e-68 264.2 283 59.0
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 1.7e-68 263.8 311 55.0
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 1.1e-67 261.2 265 60.4
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 1.8e-67 260.4 265 58.9
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 4.1e-67 259.2 315 54.0
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 7.0e-67 258.5 323 53.6
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 2.7e-66 256.5 313 51.4
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.3e-65 254.2 314 53.5
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 1.3e-65 254.2 268 59.3
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 3.8e-65 252.7 290 55.2
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 3.8e-65 252.7 254 57.5
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 5.0e-65 252.3 309 52.1
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 5.0e-65 252.3 265 57.7
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 1.1e-64 251.1 311 50.8
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.9e-64 250.4 306 54.6
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 9.5e-64 248.1 298 54.0
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 2.1e-63 246.9 306 54.2
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 3.6e-63 246.1 286 55.2
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 6.1e-63 245.4 299 52.2
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 1.8e-62 243.8 303 53.1
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.3e-62 243.4 241 59.8
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.3e-62 243.4 265 56.2
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 4.0e-62 242.7 279 55.2
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 2.0e-61 240.4 302 51.0
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 5.7e-61 238.8 264 54.9
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 2.8e-60 236.5 265 55.5
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 3.7e-60 236.1 296 52.7
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.8e-59 233.8 280 53.2
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.8e-59 233.8 315 51.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 2.4e-59 233.4 291 52.6
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.4e-59 232.3 313 51.4
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 7.0e-59 231.9 301 51.2
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 7.0e-59 231.9 301 51.2
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 9.2e-59 231.5 301 51.2
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 9.2e-59 231.5 313 51.4
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 1.6e-58 230.7 262 53.8
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 2.7e-58 229.9 299 51.8
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.7e-58 229.9 301 50.8
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.7e-58 229.9 301 50.8
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.5e-58 229.6 310 50.0
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 3.5e-58 229.6 318 49.4
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 7.8e-58 228.4 310 50.0
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.8e-58 228.4 310 50.0
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 3.9e-57 226.1 309 46.6
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.3e-56 223.0 257 55.3
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 4.3e-56 222.6 297 48.8
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.2e-55 221.1 298 48.7
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.1e-55 220.3 293 49.8
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 2.1e-55 220.3 253 53.0
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 4.7e-55 219.2 304 47.4
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 6.1e-55 218.8 267 53.6
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 8.0e-55 218.4 241 55.6
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 1.0e-54 218.0 289 49.1
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.0e-54 218.0 272 52.6
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.4e-54 217.6 306 49.0
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 1.8e-54 217.2 257 54.9
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 4.0e-54 216.1 257 55.3
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 4.0e-54 216.1 279 49.5
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 4.0e-54 216.1 296 50.0
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 5.8e-53 212.2 304 48.4
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 7.5e-53 211.8 299 47.8
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 7.5e-53 211.8 303 46.9
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 9.8e-53 211.5 265 52.1
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.7e-52 210.7 300 47.3
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.7e-52 210.7 244 51.2
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 4.9e-52 209.1 312 46.5
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 1.1e-51 208.0 308 46.8
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 1.4e-51 207.6 264 49.2
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 2.4e-51 206.8 246 51.2
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 4.1e-51 206.1 181 63.5
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 7.0e-51 205.3 252 51.2
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 9.2e-51 204.9 286 47.2
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 1.6e-50 204.1 286 47.2
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.6e-50 204.1 317 46.4
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 2.7e-50 203.4 315 43.5
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 4.6e-50 202.6 268 50.0
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 6.0e-50 202.2 302 47.0
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 6.0e-50 202.2 302 47.0
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 1.3e-49 201.1 299 46.8
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.3e-49 200.3 299 46.8
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 8.6e-49 198.4 277 46.2
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.5e-48 196.8 243 49.4
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 9.5e-48 194.9 283 48.4
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 9.5e-48 194.9 192 54.2
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 6.8e-46 188.7 241 49.8
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.6e-45 186.8 298 44.6
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 3.4e-45 186.4 278 48.2
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.2e-44 183.7 246 47.6
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 8.3e-44 181.8 277 45.5
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 3.2e-43 179.9 221 54.3
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 9.2e-43 178.3 248 46.4
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 2.1e-42 177.2 240 47.5
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 6.6e-41 172.2 191 53.9
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 6.6e-41 172.2 302 43.4
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 3.6e-39 166.4 303 41.9
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 8.1e-39 165.2 167 58.1
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 3.1e-38 163.3 274 43.1
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 4.4e-37 159.5 203 51.7
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.7e-36 157.5 194 48.5
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 8.3e-36 155.2 305 40.0
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.4e-35 154.5 308 39.6
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 4.6e-34 149.4 105 73.3
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.1e-32 144.8 274 44.2
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 1.1e-30 138.3 307 41.4
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 7.1e-27 125.6 299 36.1
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 2.3e-25 120.6 241 42.3
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 3.0e-25 120.2 285 38.2
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 3.9e-25 119.8 274 39.1
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 8.1e-23 112.1 223 38.1
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 3.1e-22 110.2 70 75.7
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 3.5e-18 96.7 248 33.9
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 8.7e-17 92.0 317 32.2
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 1.5e-16 91.3 79 63.3
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.3e-15 88.2 230 34.3
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.0e-14 83.2 232 31.9
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 3.2e-11 73.6 83 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.7e-10 70.5 137 35.8
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.3e-09 67.4 129 34.9
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 7.4e-08 62.4 306 34.0


User provided reference genes

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