Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.7e-137 491.1 236 100.0
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.8e-65 252.7 164 75.6
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.6e-63 246.1 202 63.4
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.5e-63 245.4 127 89.0
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 1.7e-57 226.9 123 81.3
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 2.2e-57 226.5 127 78.7
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 2.8e-57 226.1 126 80.2
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 3.7e-57 225.7 126 78.6
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 3.7e-57 225.7 124 80.6
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.7e-57 225.7 127 78.0
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 4.8e-57 225.3 124 80.6
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 4.8e-57 225.3 127 79.5
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 6.3e-57 224.9 123 79.7
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 8.2e-57 224.6 127 78.0
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 8.2e-57 224.6 123 80.5
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 8.2e-57 224.6 124 80.6
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 1.1e-56 224.2 124 81.5
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 1.1e-56 224.2 127 76.4
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 1.4e-56 223.8 124 79.8
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 1.4e-56 223.8 130 76.2
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 1.8e-56 223.4 126 78.6
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 2.4e-56 223.0 124 79.8
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 2.4e-56 223.0 124 80.6
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 3.1e-56 222.6 126 78.6
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 4.1e-56 222.2 121 81.8
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 5.3e-56 221.9 123 78.9
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 9.1e-56 221.1 121 80.2
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 9.1e-56 221.1 121 80.2
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.2e-55 220.7 124 78.2
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 1.2e-55 220.7 124 79.0
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 1.6e-55 220.3 127 75.6
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.6e-55 220.3 144 70.8
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 1.6e-55 220.3 124 79.8
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.0e-55 219.9 126 77.8
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 2.0e-55 219.9 123 80.5
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 2.6e-55 219.5 121 78.5
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 3.5e-55 219.2 128 78.1
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 3.5e-55 219.2 126 77.8
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 4.5e-55 218.8 127 75.6
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 4.5e-55 218.8 130 73.8
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 4.5e-55 218.8 126 74.6
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 5.9e-55 218.4 122 80.3
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 5.9e-55 218.4 129 76.7
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 5.9e-55 218.4 126 76.2
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 7.7e-55 218.0 123 78.0
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 7.7e-55 218.0 123 78.0
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 7.7e-55 218.0 125 76.8
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 7.7e-55 218.0 124 78.2
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 7.7e-55 218.0 127 77.2
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 1.0e-54 217.6 123 79.7
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.0e-54 217.6 123 79.7
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 1.0e-54 217.6 123 78.9
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 1.0e-54 217.6 129 76.0
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.7e-54 216.9 127 74.8
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 1.7e-54 216.9 123 78.0
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 1.7e-54 216.9 126 77.8
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.2e-54 216.5 123 78.9
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 2.2e-54 216.5 123 77.2
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.9e-54 216.1 129 76.0
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.8e-54 215.7 121 79.3
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 5.0e-54 215.3 123 76.4
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 5.0e-54 215.3 127 73.2
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 6.5e-54 214.9 121 79.3
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 6.5e-54 214.9 127 75.6
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 8.5e-54 214.5 129 76.7
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 1.1e-53 214.2 122 77.9
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 1.5e-53 213.8 129 76.0
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 1.9e-53 213.4 127 73.2
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 1.9e-53 213.4 153 62.7
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 2.5e-53 213.0 128 71.9
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 3.2e-53 212.6 129 74.4
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.2e-53 212.6 123 78.0
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 4.2e-53 212.2 127 73.2
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 4.2e-53 212.2 126 73.8
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 5.5e-53 211.8 126 72.2
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 5.5e-53 211.8 122 78.7
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 7.2e-53 211.5 127 73.2
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 7.2e-53 211.5 124 74.2
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 2.1e-52 209.9 130 73.1
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 2.1e-52 209.9 123 74.8
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 2.1e-52 209.9 123 74.8
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 2.1e-52 209.9 123 74.8
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 2.1e-52 209.9 124 73.4
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 2.7e-52 209.5 123 74.8
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 2.7e-52 209.5 124 76.6
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 6.1e-52 208.4 126 73.8
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 8.0e-52 208.0 123 73.2
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 1.0e-51 207.6 145 66.9
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 1.0e-51 207.6 122 77.0
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 1.4e-51 207.2 120 75.8
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 2.3e-51 206.5 121 73.6
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 2.3e-51 206.5 128 70.3
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 3.0e-51 206.1 120 75.8
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 6.8e-51 204.9 123 72.4
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 8.8e-51 204.5 127 72.4
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 1.2e-50 204.1 135 65.9
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 1.5e-50 203.8 120 72.5
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 2.6e-50 203.0 130 70.0
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 3.4e-50 202.6 134 69.4
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 5.7e-50 201.8 129 69.8
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 7.5e-50 201.4 123 72.4
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 9.8e-50 201.1 120 71.7
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 2.2e-49 199.9 121 72.7
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 2.8e-49 199.5 132 67.4
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.8e-49 199.5 136 69.1
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 8.3e-49 198.0 119 69.7
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.1e-48 197.6 111 78.4
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.4e-48 197.2 122 72.1
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.2e-47 194.1 157 58.6
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 3.8e-46 189.1 114 71.9
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 6.5e-46 188.3 152 61.8
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 6.5e-46 188.3 120 69.2
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.2e-45 186.0 118 72.9
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.7e-44 183.0 190 50.5
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.4e-42 176.0 137 62.0
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 1.7e-41 173.7 123 66.7
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.6e-39 167.2 138 60.1
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.7e-39 166.4 126 62.7
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 3.8e-38 162.5 268 37.7
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 3.0e-35 152.9 136 55.1
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.0e-35 152.9 86 76.7
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 1.2e-34 151.0 130 50.8
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 1.5e-34 150.6 120 56.7
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 1.3e-33 147.5 84 75.0
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.9e-33 146.4 86 76.7
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 4.1e-32 142.5 87 69.0
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.0e-30 137.9 89 70.8
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.2e-28 131.0 100 63.0
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 2.3e-27 126.7 90 65.6
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 2.0e-26 123.6 113 48.7
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 2.1e-20 103.6 67 68.7
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 4.7e-20 102.4 128 40.6
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.1e-16 89.4 70 64.3
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 1.5e-10 70.9 38 73.7
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 5.8e-10 68.9 38 65.8
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.7e-09 67.4 54 50.0
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.0e-06 58.2 32 78.1


User provided reference genes

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