Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 1.1e-84 316.6 158 100.0
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 3.5e-51 205.3 162 65.4
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 4.5e-51 204.9 156 64.7
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 4.2e-49 198.4 124 75.8
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 4.2e-49 198.4 124 75.8
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 5.5e-49 198.0 146 69.2
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.2e-48 196.8 142 65.5
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 2.1e-48 196.1 146 68.5
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 2.1e-48 196.1 162 64.8
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 2.1e-48 196.1 149 65.8
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 2.1e-48 196.1 149 65.8
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 3.6e-48 195.3 146 65.8
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.4e-47 193.4 116 78.4
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 2.3e-47 192.6 135 68.9
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 3.0e-47 192.2 138 65.2
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.0e-47 192.2 142 64.1
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 5.2e-47 191.4 161 62.7
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 5.2e-47 191.4 142 63.4
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 5.2e-47 191.4 142 63.4
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 6.8e-47 191.0 136 66.9
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 3.4e-46 188.7 119 72.3
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 3.4e-46 188.7 126 69.8
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 4.4e-46 188.3 149 63.1
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 4.4e-46 188.3 142 62.0
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 5.7e-46 188.0 152 60.5
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 5.7e-46 188.0 127 68.5
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 7.5e-46 187.6 144 63.9
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 7.5e-46 187.6 126 68.3
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 7.5e-46 187.6 126 68.3
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 7.5e-46 187.6 139 65.5
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 1.3e-45 186.8 142 61.3
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.7e-45 186.4 143 65.0
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 2.2e-45 186.0 138 63.8
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.8e-45 185.7 123 69.9
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 3.7e-45 185.3 120 71.7
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 4.8e-45 184.9 172 58.1
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 6.3e-45 184.5 123 69.9
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 6.3e-45 184.5 123 69.9
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 6.3e-45 184.5 147 62.6
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 6.3e-45 184.5 147 62.6
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 8.3e-45 184.1 122 71.3
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 8.3e-45 184.1 123 69.1
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 8.3e-45 184.1 123 69.1
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 8.3e-45 184.1 152 61.2
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.1e-44 183.7 147 61.2
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.1e-44 183.7 171 59.1
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.1e-44 183.7 152 60.5
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.4e-44 183.3 123 71.5
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.4e-44 183.3 127 66.1
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.4e-44 183.3 139 63.3
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 1.8e-44 183.0 122 68.9
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.8e-44 183.0 181 52.5
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 3.1e-44 182.2 122 71.3
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 4.1e-44 181.8 151 58.9
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 5.4e-44 181.4 123 69.1
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 7.0e-44 181.0 117 71.8
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 7.0e-44 181.0 122 69.7
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 9.1e-44 180.6 152 61.8
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 9.1e-44 180.6 122 69.7
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 1.6e-43 179.9 165 58.8
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.7e-43 179.1 126 64.3
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 3.5e-43 178.7 151 58.3
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 4.5e-43 178.3 126 67.5
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.9e-43 177.9 121 69.4
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 1.0e-42 177.2 122 66.4
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.3e-42 176.8 130 63.8
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.3e-42 176.8 149 59.7
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.7e-42 176.4 124 65.3
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 2.2e-42 176.0 147 57.8
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 5.0e-42 174.9 130 65.4
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 5.0e-42 174.9 128 65.6
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 5.0e-42 174.9 138 61.6
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 6.5e-42 174.5 134 61.9
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 6.5e-42 174.5 142 62.0
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.1e-41 173.7 134 61.2
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 1.5e-41 173.3 128 65.6
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.9e-41 172.9 160 55.0
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 5.5e-41 171.4 127 66.1
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 7.2e-41 171.0 157 57.3
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 1.2e-40 170.2 113 71.7
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 8.0e-40 167.5 133 59.4
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.0e-39 167.2 126 63.5
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 2.3e-39 166.0 141 58.2
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 2.6e-38 162.5 137 57.7
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 2.4e-36 156.0 162 55.6
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 9.2e-36 154.1 93 77.4
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 9.2e-36 154.1 146 54.1
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 1.6e-35 153.3 132 58.3
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 3.8e-34 148.7 95 72.6
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 3.8e-34 148.7 120 59.2
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.9e-33 146.4 124 60.5
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 2.1e-32 142.9 165 50.9
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 4.7e-32 141.7 119 55.5
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 8.9e-31 137.5 133 57.1
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 1.2e-30 137.1 165 49.1
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 7.5e-30 134.4 114 54.4
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 1.3e-29 133.7 121 52.1
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 3.7e-29 132.1 102 61.8
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 8.3e-29 131.0 121 57.0
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 1.1e-28 130.6 95 67.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 9.2e-28 127.5 102 59.8
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.0e-26 121.7 103 58.3
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.1e-25 120.6 124 52.4
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 7.3e-25 117.9 141 44.7
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 6.2e-24 114.8 76 68.4
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 6.2e-24 114.8 100 57.0
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.6e-19 100.1 70 70.0
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.0e-18 97.4 71 67.6
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.6e-16 90.1 53 81.1
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 6.2e-16 88.2 55 72.7
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 4.0e-15 85.5 48 83.3
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 8.9e-15 84.3 96 54.2
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 7.1e-12 74.7 102 38.2
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 7.1e-12 74.7 50 58.0
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 6.6e-10 68.2 78 51.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 8.6e-10 67.8 60 45.0


User provided reference genes

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