Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.6e-77 292.7 151 100.0
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.1e-65 251.9 219 67.6
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.5e-51 206.5 213 60.1
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.7e-34 148.7 199 46.7
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 2.4e-33 146.0 204 45.6
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.2e-32 143.7 212 44.8
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.0e-32 142.9 212 44.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 5.9e-32 141.4 212 45.3
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 7.7e-32 141.0 212 43.4
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 1.0e-31 140.6 212 43.9
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.7e-31 139.8 209 44.0
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.7e-31 139.8 212 43.9
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 1.7e-31 139.8 212 43.9
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 3.8e-31 138.7 216 43.1
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 3.8e-31 138.7 214 44.9
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 5.0e-31 138.3 212 44.3
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 6.5e-31 137.9 211 43.6
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 8.5e-31 137.5 212 44.8
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 1.1e-30 137.1 224 43.3
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.1e-30 137.1 214 43.9
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.4e-30 136.7 212 44.8
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.9e-30 136.3 212 43.9
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.9e-30 136.3 212 42.9
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 3.2e-30 135.6 214 42.1
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.6e-29 133.3 212 42.9
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 2.1e-29 132.9 212 42.5
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 2.1e-29 132.9 210 43.8
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.7e-29 132.5 121 61.2
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 3.6e-29 132.1 209 42.6
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.6e-29 132.1 211 43.6
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 4.6e-29 131.7 211 41.2
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 4.6e-29 131.7 209 42.6
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 4.6e-29 131.7 209 42.6
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 4.6e-29 131.7 207 43.0
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 7.9e-29 131.0 212 42.9
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 7.9e-29 131.0 210 41.9
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.0e-28 130.6 211 42.2
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 1.4e-28 130.2 209 42.1
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 1.4e-28 130.2 226 41.6
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.8e-28 129.8 211 40.8
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.8e-28 129.8 212 41.5
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.8e-28 129.8 208 42.8
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.3e-28 129.4 212 42.9
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 3.0e-28 129.0 212 41.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 3.0e-28 129.0 212 41.5
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 3.9e-28 128.6 208 42.3
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 5.1e-28 128.3 212 42.0
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 6.7e-28 127.9 212 40.6
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 6.7e-28 127.9 209 41.6
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 8.8e-28 127.5 209 41.6
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 8.8e-28 127.5 212 41.5
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 1.1e-27 127.1 209 42.1
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.1e-27 127.1 212 39.2
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.1e-27 127.1 203 41.9
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 2.0e-27 126.3 121 57.9
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 2.6e-27 125.9 206 41.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 2.6e-27 125.9 212 40.1
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 3.3e-27 125.6 211 40.3
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 3.3e-27 125.6 212 40.1
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 4.4e-27 125.2 212 40.1
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 4.4e-27 125.2 209 41.6
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 5.7e-27 124.8 211 40.8
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 5.7e-27 124.8 212 40.6
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 5.7e-27 124.8 210 40.0
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 9.7e-27 124.0 121 55.4
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 9.7e-27 124.0 211 41.2
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.3e-26 123.6 209 40.7
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.7e-26 123.2 209 41.6
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 2.2e-26 122.9 215 40.0
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 2.8e-26 122.5 212 39.6
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 6.3e-26 121.3 121 55.4
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 8.2e-26 120.9 211 39.8
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 8.2e-26 120.9 178 44.9
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 1.4e-25 120.2 124 54.0
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 1.4e-25 120.2 213 42.3
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 4.1e-25 118.6 121 54.5
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 4.1e-25 118.6 210 38.1
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 9.1e-25 117.5 207 40.6
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 1.2e-24 117.1 121 55.4
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 5.9e-24 114.8 201 40.3
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 5.9e-24 114.8 121 52.9
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 7.7e-24 114.4 252 37.3
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.0e-23 114.0 116 55.2
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.3e-23 113.6 212 39.2
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 9.4e-22 107.5 252 35.7
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 3.0e-20 102.4 195 37.4
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 2.6e-19 99.4 88 61.4
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 3.3e-19 99.0 212 34.4
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 7.4e-19 97.8 208 35.6
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 1.3e-18 97.1 116 45.7
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 3.7e-18 95.5 224 34.4
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 6.3e-18 94.7 188 37.2
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 4.1e-17 92.0 201 37.8
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 9.1e-17 90.9 209 35.9
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.5e-16 88.6 221 33.9
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.0e-15 87.4 226 32.7
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.0e-15 87.4 226 32.7
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 4.2e-14 82.0 89 50.6
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 6.1e-13 78.2 147 39.5
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 1.0e-12 77.4 207 30.4
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 7.5e-11 71.2 105 40.0
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 2.2e-10 69.7 45 71.1
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.7e-10 68.9 235 32.8
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 6.3e-10 68.2 45 68.9
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 2.4e-09 66.2 209 28.2
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 1.2e-08 63.9 121 38.0
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 8.5e-07 57.8 135 34.1


User provided reference genes

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