Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 1.0e-94 350.5 240 100.0
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 2.1e-23 113.6 251 55.8
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 5.7e-21 105.5 251 55.0
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 7.4e-21 105.1 251 54.2
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 9.7e-21 104.8 251 54.6
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 1.7e-20 104.0 247 55.9
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 2.4e-19 100.1 245 55.1
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.5e-18 95.9 254 52.8
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 7.7e-18 95.1 247 54.3
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.3e-17 94.4 247 55.5
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 6.5e-17 92.0 238 54.2
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.1e-16 91.3 244 52.0
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 2.5e-16 90.1 254 51.6
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 2.5e-16 90.1 244 52.5
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 4.2e-16 89.4 254 51.6
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 9.4e-16 88.2 242 51.2
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 6.1e-15 85.5 247 52.2
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 1.4e-14 84.3 245 44.5
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 2.3e-14 83.6 261 49.8
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 1.5e-13 80.9 230 50.4
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.5e-13 80.9 245 53.5
PGR004G0186 Punica granatum HOM05D007634 ORTHO05D004310 2.2e-12 77.0 246 49.2
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 6.3e-12 75.5 231 50.6
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.4e-11 74.3 91 48.4
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 3.1e-11 73.2 274 42.3
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 9.1e-11 71.6 238 51.7
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 1.2e-10 71.2 91 47.3
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 2.6e-10 70.1 211 51.7
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 3.4e-10 69.7 91 47.3
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 4.5e-10 69.3 248 48.0
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 7.7e-10 68.6 238 51.3
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.3e-09 67.8 234 52.6
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.3e-09 67.8 89 46.1
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.3e-09 67.8 232 50.9
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 1.7e-09 67.4 242 47.5
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 2.2e-09 67.0 248 50.8
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 2.2e-09 67.0 261 47.5
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 3.8e-09 66.2 246 48.8
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 5.0e-09 65.9 91 42.9
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 5.0e-09 65.9 93 47.3
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 5.0e-09 65.9 93 47.3
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 8.5e-09 65.1 259 45.9
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 8.5e-09 65.1 240 49.2
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 8.5e-09 65.1 250 38.4
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.4e-08 64.3 237 46.8
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.4e-08 64.3 218 50.9
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 1.4e-08 64.3 242 50.0
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 1.9e-08 63.9 239 46.9
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.9e-08 63.9 251 49.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 2.5e-08 63.5 87 42.5
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 2.5e-08 63.5 248 48.0
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 3.2e-08 63.2 244 48.4
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 5.5e-08 62.4 236 48.3
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 7.2e-08 62.0 235 49.4
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 7.2e-08 62.0 232 51.7
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 9.4e-08 61.6 62 54.8
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 2.7e-07 60.1 91 44.0
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.7e-07 60.1 91 42.9
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.7e-07 60.1 248 44.4
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 2.7e-07 60.1 91 42.9
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 3.6e-07 59.7 237 48.1
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 8.0e-07 58.5 245 45.3
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 1.0e-06 58.2 235 45.5
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.0e-06 58.2 251 47.8
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.4e-06 57.8 251 47.8
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 1.4e-06 57.8 244 46.7
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 1.8e-06 57.4 211 50.7
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 3.0e-06 56.6 240 32.5
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 5.2e-06 55.8 239 37.7
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 8.8e-06 55.1 246 47.6


User provided reference genes

Program Settings