Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04014 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.7e-162 575.9 273 100.0
Eucgr.H04022 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.5e-81 306.2 274 59.9
Eucgr.E02338 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.1e-28 128.6 258 33.3
Eucgr.E02335 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.1e-27 127.1 275 34.2
Eucgr.E02968 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.7e-26 122.1 275 32.0
Eucgr.B03809 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.9e-25 120.6 298 28.9
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 6.5e-21 105.5 273 27.8
Eucgr.E02334 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.7e-19 100.1 249 30.9
Dinv38970 Davidia involucrata HOM05D000151 ORTHO05D000074 4.6e-19 99.4 259 30.1
Dinv38965 Davidia involucrata HOM05D000151 ORTHO05D000074 6.0e-19 99.0 259 29.7
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-18 98.2 259 29.7
Dinv38968 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-18 97.4 259 29.7
Dinv23958 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-18 96.7 259 29.7
Dinv38967 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-18 96.7 259 29.3
Eucgr.H03049 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.0e-18 96.7 307 30.3
Eucgr.H00542 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.7e-18 95.5 283 28.3
Eucgr.H00638 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.5e-17 94.4 294 27.9
Eucgr.H00629 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.9e-17 94.0 309 27.8
Eucgr.H00636 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.3e-17 92.8 281 29.5
Eucgr.H03056 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.4e-17 92.0 310 29.4
Eucgr.H03048 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.7e-16 89.7 305 28.2
Eucgr.F03344 Eucalyptus grandis HOM05D000151 ORTHO05D000074 8.2e-16 88.6 268 29.5
Eucgr.H03053 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.8e-15 87.4 310 27.4
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.8e-15 87.4 314 24.8
Oeu030066.1 Olea europaea HOM05D000151 ORTHO05D000074 5.3e-15 85.9 299 28.1
Atru.chr2.1462 Acer truncatum HOM05D000048 ORTHO05D000436 6.9e-15 85.5 260 29.2
Eucgr.E02972 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.9e-15 85.5 270 30.7
Eucgr.H03055 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.9e-15 85.5 309 28.2
Eucgr.H03050 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-14 84.0 299 28.4
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.5e-14 82.8 314 26.4
Peaxi162Scf39827g00001 Petunia axillaris HOM05D000151 ORTHO05D000074 5.8e-14 82.4 293 25.9
CAN.G1804.4 Capsicum annuum HOM05D000151 ORTHO05D000074 7.6e-14 82.0 302 26.5
TAR636G1766 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-13 81.3 255 27.1
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-13 80.9 265 24.5
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.2e-13 80.5 311 26.4
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.2e-13 80.5 317 26.5
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.8e-13 79.7 312 24.7
Manes.01G063800 Manihot esculenta HOM05D000151 ORTHO05D000074 3.8e-13 79.7 268 29.1
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-13 79.7 317 26.5
Ciclev10024484m.g Citrus clementina HOM05D000151 ORTHO05D000074 6.5e-13 79.0 241 28.2
Duzib084G1040 Durio zibethinus HOM05D000151 ORTHO05D000074 1.1e-12 78.2 290 25.9
Eucgr.H00626 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.1e-12 78.2 263 29.3
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 1.9e-12 77.4 328 24.4
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.9e-12 77.4 320 25.3
Peaxi162Scf00074g00077 Petunia axillaris HOM05D000151 ORTHO05D000074 2.5e-12 77.0 300 28.0
Peaxi162Scf00271g00224 Petunia axillaris HOM05D000151 ORTHO05D000074 2.5e-12 77.0 274 26.3
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.5e-12 77.0 314 26.4
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.2e-12 76.3 311 25.1
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.2e-12 76.3 314 26.1
Eucgr.H00630 Eucalyptus grandis HOM05D000151 ORTHO05D000074 5.5e-12 75.9 293 26.3
Eucgr.H00645 Eucalyptus grandis HOM05D000151 ORTHO05D000074 5.5e-12 75.9 280 26.1
Nitab4.5_0003015g0050 Nicotiana tabacum HOM05D000151 ORTHO05D000074 5.5e-12 75.9 307 24.4
Dinv38983 Davidia involucrata HOM05D000151 ORTHO05D000074 9.3e-12 75.1 265 24.5
Eucgr.H03054 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-11 74.7 309 27.2
MD05G1357500 Malus domestica HOM05D000151 ORTHO05D000074 1.2e-11 74.7 293 26.3
Nitab4.5_0000969g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.2e-11 74.7 287 25.1
Rhsim02G0223900 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.5e-11 73.2 233 27.5
COL.COLO4_24406 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.6e-11 72.8 280 22.5
Thecc.03G275800 Theobroma cacao HOM05D000151 ORTHO05D000074 6.1e-11 72.4 306 24.2
Ciclev10020625m.g Citrus clementina HOM05D000151 ORTHO05D000074 7.9e-11 72.0 238 26.9
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-10 71.6 277 26.7
Peaxi162Scf00017g00231 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-10 71.6 313 24.3
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-10 70.9 243 28.0
Dinv38964 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-10 70.9 232 26.7
Rhsim02G0225200 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.9e-10 69.7 309 24.9
Hma1.2p1_2038F.1_g312030 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.1e-10 69.3 303 24.8
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 5.1e-10 69.3 230 28.3
Atru.chr10.13 Acer truncatum HOM05D000151 ORTHO05D000074 6.7e-10 68.9 224 25.0
Atru.chr9.1120 Acer truncatum HOM05D000151 ORTHO05D000074 8.7e-10 68.6 251 27.1
Atru.chr9.2200 Acer truncatum HOM05D000151 ORTHO05D000074 8.7e-10 68.6 248 23.8
AUR62008184 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.7e-10 68.6 259 23.9
CAN.G567.4 Capsicum annuum HOM05D000151 ORTHO05D000074 1.1e-09 68.2 312 25.0
Rhsim02G0223800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.5e-09 67.8 308 24.4
FAN10G1847 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.9e-09 67.4 297 26.9
Gorai.011G286500 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.5e-09 67.0 271 25.1
Gorai.011G286600 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.5e-09 67.0 273 24.9
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.5e-09 67.0 325 24.3
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.3e-09 66.6 319 22.9
FAN06G4102 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.3e-09 66.6 279 26.2
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 3.3e-09 66.6 257 24.9
Dinv38984 Davidia involucrata HOM05D000151 ORTHO05D000074 4.3e-09 66.2 273 24.5
Gohir.A10G235800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.3e-09 66.2 271 24.4
Gohir.A11G013450 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.3e-09 66.2 240 27.5
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 4.3e-09 66.2 212 28.3
QL11p010874 Quercus lobata HOM05D000151 ORTHO05D000074 4.3e-09 66.2 259 27.0
Psat0s2742g0120 Pisum sativum HOM05D000151 ORTHO05D000074 5.7e-09 65.9 236 25.0
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.7e-09 65.1 231 26.4
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 9.7e-09 65.1 229 27.9
Peaxi162Scf00119g00111 Petunia axillaris HOM05D000151 ORTHO05D000074 9.7e-09 65.1 320 24.1
Rhsim02G0224200 Rhododendron simsii HOM05D000151 ORTHO05D000074 9.7e-09 65.1 309 24.3
TAR636G3441 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.7e-09 65.1 226 24.3
CAN.G1305.8 Capsicum annuum HOM05D000151 ORTHO05D000074 1.6e-08 64.3 241 26.1
PGSC0003DMG402009543 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.6e-08 64.3 277 25.3
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-08 64.3 282 22.7
CAN.G137.43 Capsicum annuum HOM05D000151 ORTHO05D000074 2.2e-08 63.9 228 25.0
FAN01G0776 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.2e-08 63.9 301 24.9
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 2.2e-08 63.9 301 24.9
TAR627G0263 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.2e-08 63.9 216 25.5
FvH4_7g21590 Fragaria vesca HOM05D000151 ORTHO05D000074 2.8e-08 63.5 300 25.0
FAN27G0663 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.7e-08 63.2 285 26.7
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.7e-08 63.2 327 23.2
Aqoxy7G00901 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.8e-08 62.8 251 23.9
Psat0s7650g0040 Pisum sativum HOM05D000151 ORTHO05D000074 4.8e-08 62.8 236 24.6
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.3e-08 62.4 326 24.5
Prupe.1G227900 Prunus persica HOM05D000151 ORTHO05D000074 6.3e-08 62.4 234 26.5
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.1e-07 61.6 332 23.5
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 1.4e-07 61.2 245 20.8
Nitab4.5_0004051g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.8e-07 60.8 291 23.7
Sopen04g025070 Solanum pennellii HOM05D000151 ORTHO05D000074 1.8e-07 60.8 266 25.2
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 2.4e-07 60.5 298 22.8
RcHm_v2.0_Chr5g0032291 Rosa chinensis HOM05D000151 ORTHO05D000074 2.4e-07 60.5 224 26.3
Eucgr.H00547 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.1e-07 60.1 163 29.4
Prupe.1G227500 Prunus persica HOM05D000151 ORTHO05D000074 3.1e-07 60.1 236 25.8
FAN06G3114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.1e-07 59.7 303 24.8
Peaxi162Scf00064g01639 Petunia axillaris HOM05D000151 ORTHO05D000074 4.1e-07 59.7 272 25.4
Prupe.6G285400 Prunus persica HOM05D000151 ORTHO05D000074 4.1e-07 59.7 238 26.9
QL11p052376 Quercus lobata HOM05D000151 ORTHO05D000074 4.1e-07 59.7 203 28.1
QL11p053242 Quercus lobata HOM05D000151 ORTHO05D000074 4.1e-07 59.7 203 28.1
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.3e-07 59.3 241 25.7
Gohir.A10G237000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 5.3e-07 59.3 242 25.6
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 5.3e-07 59.3 342 23.1
PGSC0003DMG400038971 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.9e-07 58.9 316 22.5
FvH4_7g21350 Fragaria vesca HOM05D000151 ORTHO05D000074 9.0e-07 58.5 297 26.3
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.0e-07 58.5 249 25.3
Dinv40802 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-06 58.2 230 25.7
Eucgr.H00631 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.5e-06 57.8 107 33.6
COL.COLO4_05771 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.0e-06 57.4 270 24.1
COL.COLO4_12589 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.0e-06 57.4 287 24.4
Aqoxy5G01074 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-06 57.0 232 24.6
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-06 57.0 163 25.8
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-06 56.6 149 26.2
Gohir.D10G248775 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.4e-06 56.6 241 23.7
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 4.5e-06 56.2 311 21.9
FAN15G2858 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.5e-06 56.2 294 24.5
Haze_06933 Corylus avellana HOM05D000151 ORTHO05D000074 5.9e-06 55.8 298 24.8
Hma1.2p1_0916F.1_g236540 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.9e-06 55.8 138 29.0
FvH4_6g18890 Fragaria vesca HOM05D001286 ORTHO05D000440 7.7e-06 55.5 262 23.7
FAN15G3715 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.7e-06 55.5 212 28.3
FAN14G2386 Fragaria x ananassa HOM05D001286 ORTHO05D000440 1.0e-05 55.1 262 23.3


User provided reference genes

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